Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdlim2Q8R1G6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdlim2Q8R1G6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdlim2Q8R1G6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdlim2Q8R1G6 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdlim2Q8R1G6 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pdlim2Q8R1G6 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Pdlim2Q8R1G6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdlim2Q8R1G6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdlim2Q8R1G6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pdlim2Q8R1G6 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdlim2Q8R1G6 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Pdlim2Q8R1G6 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdlim2Q8R1G6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Pdlim2Q8R1G6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.05■□□□□ 0.8
Pdlim2Q8R1G6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.05■□□□□ 0.8
Pdlim2Q8R1G6 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.05■□□□□ 0.8
Pdlim2Q8R1G6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdlim2Q8R1G6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdlim2Q8R1G6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdlim2Q8R1G6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdlim2Q8R1G6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Pdlim2Q8R1G6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdlim2Q8R1G6 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdlim2Q8R1G6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pdlim2Q8R1G6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Pdlim2Q8R1G6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pdlim2Q8R1G6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdlim2Q8R1G6 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdlim2Q8R1G6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdlim2Q8R1G6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdlim2Q8R1G6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.04■□□□□ 0.8
Pdlim2Q8R1G6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pdlim2Q8R1G6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Pdlim2Q8R1G6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdlim2Q8R1G6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pdlim2Q8R1G6 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdlim2Q8R1G6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Pdlim2Q8R1G6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdlim2Q8R1G6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pdlim2Q8R1G6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pdlim2Q8R1G6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdlim2Q8R1G6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdlim2Q8R1G6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pdlim2Q8R1G6 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pdlim2Q8R1G6 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pdlim2Q8R1G6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pdlim2Q8R1G6 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pdlim2Q8R1G6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pdlim2Q8R1G6 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pdlim2Q8R1G6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pdlim2Q8R1G6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Pdlim2Q8R1G6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pdlim2Q8R1G6 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.03■□□□□ 0.8
Pdlim2Q8R1G6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pdlim2Q8R1G6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.03■□□□□ 0.8
Pdlim2Q8R1G6 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.03■□□□□ 0.8
Pdlim2Q8R1G6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pdlim2Q8R1G6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Pdlim2Q8R1G6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pdlim2Q8R1G6 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pdlim2Q8R1G6 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pdlim2Q8R1G6 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pdlim2Q8R1G6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Pdlim2Q8R1G6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pdlim2Q8R1G6 Gm11421-201ENSMUST00000122124 294 ntBASIC20.02■□□□□ 0.8
Pdlim2Q8R1G6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.02■□□□□ 0.8
Pdlim2Q8R1G6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Pdlim2Q8R1G6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Pdlim2Q8R1G6 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Pdlim2Q8R1G6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pdlim2Q8R1G6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pdlim2Q8R1G6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pdlim2Q8R1G6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pdlim2Q8R1G6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pdlim2Q8R1G6 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Pdlim2Q8R1G6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pdlim2Q8R1G6 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pdlim2Q8R1G6 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pdlim2Q8R1G6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pdlim2Q8R1G6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Pdlim2Q8R1G6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pdlim2Q8R1G6 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pdlim2Q8R1G6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pdlim2Q8R1G6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
Pdlim2Q8R1G6 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pdlim2Q8R1G6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pdlim2Q8R1G6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pdlim2Q8R1G6 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pdlim2Q8R1G6 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pdlim2Q8R1G6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pdlim2Q8R1G6 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC20■□□□□ 0.79
Pdlim2Q8R1G6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pdlim2Q8R1G6 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pdlim2Q8R1G6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pdlim2Q8R1G6 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pdlim2Q8R1G6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pdlim2Q8R1G6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pdlim2Q8R1G6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Pdlim2Q8R1G6 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms