Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sf3a1Q8K4Z5 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC21.31■■□□□ 1
Sf3a1Q8K4Z5 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sf3a1Q8K4Z5 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC21.31■■□□□ 1
Sf3a1Q8K4Z5 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Sf3a1Q8K4Z5 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sf3a1Q8K4Z5 Gm43272-201ENSMUST00000200599 1584 ntBASIC21.31■■□□□ 1
Sf3a1Q8K4Z5 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sf3a1Q8K4Z5 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Sf3a1Q8K4Z5 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC21.3■■□□□ 1
Sf3a1Q8K4Z5 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sf3a1Q8K4Z5 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sf3a1Q8K4Z5 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Sf3a1Q8K4Z5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Sf3a1Q8K4Z5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Sf3a1Q8K4Z5 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sf3a1Q8K4Z5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Sf3a1Q8K4Z5 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.3■■□□□ 1
Sf3a1Q8K4Z5 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sf3a1Q8K4Z5 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sf3a1Q8K4Z5 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.3■■□□□ 1
Sf3a1Q8K4Z5 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC21.29■■□□□ 1
Sf3a1Q8K4Z5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sf3a1Q8K4Z5 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Sf3a1Q8K4Z5 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sf3a1Q8K4Z5 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.29■■□□□ 1
Sf3a1Q8K4Z5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sf3a1Q8K4Z5 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
Sf3a1Q8K4Z5 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.29■■□□□ 1
Sf3a1Q8K4Z5 Gm9694-201ENSMUST00000193347 1189 ntBASIC21.29■■□□□ 1
Sf3a1Q8K4Z5 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Sf3a1Q8K4Z5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sf3a1Q8K4Z5 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sf3a1Q8K4Z5 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Sf3a1Q8K4Z5 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sf3a1Q8K4Z5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Sf3a1Q8K4Z5 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sf3a1Q8K4Z5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Sf3a1Q8K4Z5 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Sf3a1Q8K4Z5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Sf3a1Q8K4Z5 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sf3a1Q8K4Z5 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sf3a1Q8K4Z5 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC21.28■■□□□ 1
Sf3a1Q8K4Z5 Mir5122-201ENSMUST00000175004 89 ntBASIC21.28■■□□□ 1
Sf3a1Q8K4Z5 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.28■■□□□ 1
Sf3a1Q8K4Z5 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Sf3a1Q8K4Z5 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.28■■□□□ 1
Sf3a1Q8K4Z5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sf3a1Q8K4Z5 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sf3a1Q8K4Z5 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sf3a1Q8K4Z5 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sf3a1Q8K4Z5 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sf3a1Q8K4Z5 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sf3a1Q8K4Z5 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sf3a1Q8K4Z5 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.27■■□□□ 1
Sf3a1Q8K4Z5 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.27■■□□□ 1
Sf3a1Q8K4Z5 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC21.27■■□□□ 1
Sf3a1Q8K4Z5 Gm10252-201ENSMUST00000209541 832 ntBASIC21.27■■□□□ 1
Sf3a1Q8K4Z5 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sf3a1Q8K4Z5 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Sf3a1Q8K4Z5 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Sf3a1Q8K4Z5 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Sf3a1Q8K4Z5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Sf3a1Q8K4Z5 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sf3a1Q8K4Z5 Gm37811-201ENSMUST00000192416 2601 ntBASIC21.25■□□□□ 0.99
Sf3a1Q8K4Z5 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sf3a1Q8K4Z5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sf3a1Q8K4Z5 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sf3a1Q8K4Z5 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sf3a1Q8K4Z5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sf3a1Q8K4Z5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sf3a1Q8K4Z5 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sf3a1Q8K4Z5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sf3a1Q8K4Z5 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sf3a1Q8K4Z5 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms