Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clrn1Q8K445 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Clrn1Q8K445 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Clrn1Q8K445 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Clrn1Q8K445 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
Clrn1Q8K445 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn1Q8K445 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn1Q8K445 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn1Q8K445 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn1Q8K445 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn1Q8K445 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn1Q8K445 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn1Q8K445 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn1Q8K445 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Clrn1Q8K445 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.45■□□□□ 0.22
Clrn1Q8K445 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn1Q8K445 Gm8520-201ENSMUST00000186517 868 ntBASIC16.45■□□□□ 0.22
Clrn1Q8K445 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.45■□□□□ 0.22
Clrn1Q8K445 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn1Q8K445 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn1Q8K445 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn1Q8K445 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.45■□□□□ 0.22
Clrn1Q8K445 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn1Q8K445 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn1Q8K445 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Clrn1Q8K445 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.45■□□□□ 0.22
Clrn1Q8K445 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn1Q8K445 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn1Q8K445 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn1Q8K445 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn1Q8K445 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn1Q8K445 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn1Q8K445 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn1Q8K445 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn1Q8K445 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn1Q8K445 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn1Q8K445 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Clrn1Q8K445 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn1Q8K445 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn1Q8K445 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn1Q8K445 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn1Q8K445 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn1Q8K445 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Clrn1Q8K445 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn1Q8K445 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Clrn1Q8K445 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Clrn1Q8K445 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn1Q8K445 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn1Q8K445 Gm10698-201ENSMUST00000182663 604 ntBASIC16.44■□□□□ 0.22
Clrn1Q8K445 Gm37292-201ENSMUST00000192062 758 ntBASIC16.44■□□□□ 0.22
Clrn1Q8K445 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn1Q8K445 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.44■□□□□ 0.22
Clrn1Q8K445 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn1Q8K445 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn1Q8K445 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn1Q8K445 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn1Q8K445 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn1Q8K445 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Clrn1Q8K445 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn1Q8K445 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn1Q8K445 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn1Q8K445 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn1Q8K445 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn1Q8K445 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.43■□□□□ 0.22
Clrn1Q8K445 Gm43183-201ENSMUST00000200632 547 ntBASIC16.43■□□□□ 0.22
Clrn1Q8K445 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.43■□□□□ 0.22
Clrn1Q8K445 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.43■□□□□ 0.22
Clrn1Q8K445 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn1Q8K445 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn1Q8K445 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn1Q8K445 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Clrn1Q8K445 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn1Q8K445 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn1Q8K445 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn1Q8K445 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn1Q8K445 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Clrn1Q8K445 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn1Q8K445 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn1Q8K445 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn1Q8K445 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Clrn1Q8K445 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn1Q8K445 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn1Q8K445 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn1Q8K445 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn1Q8K445 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn1Q8K445 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn1Q8K445 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.42■□□□□ 0.22
Clrn1Q8K445 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn1Q8K445 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.42■□□□□ 0.22
Clrn1Q8K445 Gm8969-201ENSMUST00000199694 526 ntBASIC16.42■□□□□ 0.22
Clrn1Q8K445 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn1Q8K445 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.42■□□□□ 0.22
Clrn1Q8K445 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn1Q8K445 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn1Q8K445 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Clrn1Q8K445 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn1Q8K445 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Clrn1Q8K445 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.42■□□□□ 0.22
Clrn1Q8K445 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clrn1Q8K445 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms