Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Gm16011-201ENSMUST00000121567 2662 ntBASIC10.94□□□□□ -0.66
Cystm1Q8K353 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cystm1Q8K353 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Gm45906-201ENSMUST00000208911 1430 ntBASIC10.94□□□□□ -0.66
Cystm1Q8K353 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cystm1Q8K353 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cystm1Q8K353 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cystm1Q8K353 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Gm26571-201ENSMUST00000181399 666 ntBASIC10.93□□□□□ -0.66
Cystm1Q8K353 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cystm1Q8K353 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Gm12933-201ENSMUST00000120203 872 ntBASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms