Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn1Q8K0T0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.11■□□□□ 0.81
Rtn1Q8K0T0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn1Q8K0T0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn1Q8K0T0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Rtn1Q8K0T0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rtn1Q8K0T0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Rtn1Q8K0T0 Gm715-201ENSMUST00000117865 831 ntBASIC20.1■□□□□ 0.81
Rtn1Q8K0T0 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.1■□□□□ 0.81
Rtn1Q8K0T0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.1■□□□□ 0.81
Rtn1Q8K0T0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rtn1Q8K0T0 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.1■□□□□ 0.81
Rtn1Q8K0T0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rtn1Q8K0T0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rtn1Q8K0T0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rtn1Q8K0T0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rtn1Q8K0T0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn1Q8K0T0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn1Q8K0T0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn1Q8K0T0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn1Q8K0T0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn1Q8K0T0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn1Q8K0T0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rtn1Q8K0T0 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.09■□□□□ 0.81
Rtn1Q8K0T0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.09■□□□□ 0.81
Rtn1Q8K0T0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn1Q8K0T0 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.09■□□□□ 0.81
Rtn1Q8K0T0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.09■□□□□ 0.81
Rtn1Q8K0T0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Rtn1Q8K0T0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn1Q8K0T0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.09■□□□□ 0.81
Rtn1Q8K0T0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Rtn1Q8K0T0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn1Q8K0T0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rtn1Q8K0T0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.08■□□□□ 0.81
Rtn1Q8K0T0 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.08■□□□□ 0.81
Rtn1Q8K0T0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Rtn1Q8K0T0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rtn1Q8K0T0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rtn1Q8K0T0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rtn1Q8K0T0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rtn1Q8K0T0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rtn1Q8K0T0 Gm24841-201ENSMUST00000158676 357 ntBASIC20.08■□□□□ 0.81
Rtn1Q8K0T0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.08■□□□□ 0.81
Rtn1Q8K0T0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.08■□□□□ 0.81
Rtn1Q8K0T0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rtn1Q8K0T0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rtn1Q8K0T0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rtn1Q8K0T0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rtn1Q8K0T0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rtn1Q8K0T0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.07■□□□□ 0.8
Rtn1Q8K0T0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rtn1Q8K0T0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.07■□□□□ 0.8
Rtn1Q8K0T0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rtn1Q8K0T0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rtn1Q8K0T0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rtn1Q8K0T0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.07■□□□□ 0.8
Rtn1Q8K0T0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rtn1Q8K0T0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Rtn1Q8K0T0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Rtn1Q8K0T0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rtn1Q8K0T0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Rtn1Q8K0T0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rtn1Q8K0T0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Rtn1Q8K0T0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rtn1Q8K0T0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rtn1Q8K0T0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rtn1Q8K0T0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rtn1Q8K0T0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rtn1Q8K0T0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Rtn1Q8K0T0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Rtn1Q8K0T0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn1Q8K0T0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn1Q8K0T0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.06■□□□□ 0.8
Rtn1Q8K0T0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn1Q8K0T0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.06■□□□□ 0.8
Rtn1Q8K0T0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn1Q8K0T0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Rtn1Q8K0T0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn1Q8K0T0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn1Q8K0T0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn1Q8K0T0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn1Q8K0T0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn1Q8K0T0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn1Q8K0T0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn1Q8K0T0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Rtn1Q8K0T0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn1Q8K0T0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn1Q8K0T0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Rtn1Q8K0T0 Gm12085-201ENSMUST00000119263 940 ntBASIC20.05■□□□□ 0.8
Rtn1Q8K0T0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn1Q8K0T0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn1Q8K0T0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn1Q8K0T0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn1Q8K0T0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn1Q8K0T0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Rtn1Q8K0T0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Rtn1Q8K0T0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn1Q8K0T0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Rtn1Q8K0T0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms