Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4rl1Q8K0S5 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rtn4rl1Q8K0S5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn4rl1Q8K0S5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn4rl1Q8K0S5 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rtn4rl1Q8K0S5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn4rl1Q8K0S5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn4rl1Q8K0S5 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn4rl1Q8K0S5 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn4rl1Q8K0S5 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rtn4rl1Q8K0S5 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn4rl1Q8K0S5 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rtn4rl1Q8K0S5 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.64■□□□□ 0.41
Rtn4rl1Q8K0S5 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rtn4rl1Q8K0S5 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn4rl1Q8K0S5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn4rl1Q8K0S5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn4rl1Q8K0S5 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn4rl1Q8K0S5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn4rl1Q8K0S5 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn4rl1Q8K0S5 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.63■□□□□ 0.41
Rtn4rl1Q8K0S5 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Rtn4rl1Q8K0S5 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Rtn4rl1Q8K0S5 Mir8112-201ENSMUST00000184382 131 ntBASIC17.63■□□□□ 0.41
Rtn4rl1Q8K0S5 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn4rl1Q8K0S5 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn4rl1Q8K0S5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.63■□□□□ 0.41
Rtn4rl1Q8K0S5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn4rl1Q8K0S5 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn4rl1Q8K0S5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn4rl1Q8K0S5 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn4rl1Q8K0S5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rtn4rl1Q8K0S5 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.62■□□□□ 0.41
Rtn4rl1Q8K0S5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4rl1Q8K0S5 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
Rtn4rl1Q8K0S5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Rtn4rl1Q8K0S5 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4rl1Q8K0S5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4rl1Q8K0S5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4rl1Q8K0S5 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4rl1Q8K0S5 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Rtn4rl1Q8K0S5 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4rl1Q8K0S5 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4rl1Q8K0S5 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4rl1Q8K0S5 Gm24589-201ENSMUST00000116692 94 ntBASIC17.61■□□□□ 0.41
Rtn4rl1Q8K0S5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4rl1Q8K0S5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4rl1Q8K0S5 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4rl1Q8K0S5 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4rl1Q8K0S5 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Rtn4rl1Q8K0S5 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4rl1Q8K0S5 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4rl1Q8K0S5 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4rl1Q8K0S5 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4rl1Q8K0S5 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4rl1Q8K0S5 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4rl1Q8K0S5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4rl1Q8K0S5 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.6■□□□□ 0.41
Rtn4rl1Q8K0S5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4rl1Q8K0S5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4rl1Q8K0S5 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4rl1Q8K0S5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4rl1Q8K0S5 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4rl1Q8K0S5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Rtn4rl1Q8K0S5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rtn4rl1Q8K0S5 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4rl1Q8K0S5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4rl1Q8K0S5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rl1Q8K0S5 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rl1Q8K0S5 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Rtn4rl1Q8K0S5 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Rtn4rl1Q8K0S5 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rl1Q8K0S5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rl1Q8K0S5 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Rtn4rl1Q8K0S5 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rl1Q8K0S5 Gm34391-201ENSMUST00000203706 907 ntBASIC17.59■□□□□ 0.41
Rtn4rl1Q8K0S5 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rl1Q8K0S5 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rl1Q8K0S5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rl1Q8K0S5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rl1Q8K0S5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rl1Q8K0S5 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Rtn4rl1Q8K0S5 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rl1Q8K0S5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rl1Q8K0S5 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rl1Q8K0S5 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.58■□□□□ 0.41
Rtn4rl1Q8K0S5 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.58■□□□□ 0.41
Rtn4rl1Q8K0S5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rtn4rl1Q8K0S5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Rtn4rl1Q8K0S5 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rtn4rl1Q8K0S5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rtn4rl1Q8K0S5 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Rtn4rl1Q8K0S5 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Rtn4rl1Q8K0S5 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rtn4rl1Q8K0S5 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rtn4rl1Q8K0S5 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rtn4rl1Q8K0S5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rtn4rl1Q8K0S5 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rtn4rl1Q8K0S5 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rtn4rl1Q8K0S5 Gm15794-201ENSMUST00000120182 631 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms