Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trpm6Q8CIR4 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.5■□□□□ 0.39
Trpm6Q8CIR4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.5■□□□□ 0.39
Trpm6Q8CIR4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Trpm6Q8CIR4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trpm6Q8CIR4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trpm6Q8CIR4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trpm6Q8CIR4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trpm6Q8CIR4 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.5■□□□□ 0.39
Trpm6Q8CIR4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trpm6Q8CIR4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trpm6Q8CIR4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.5■□□□□ 0.39
Trpm6Q8CIR4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trpm6Q8CIR4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trpm6Q8CIR4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trpm6Q8CIR4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trpm6Q8CIR4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.49■□□□□ 0.39
Trpm6Q8CIR4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trpm6Q8CIR4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trpm6Q8CIR4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
Trpm6Q8CIR4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trpm6Q8CIR4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trpm6Q8CIR4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trpm6Q8CIR4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trpm6Q8CIR4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trpm6Q8CIR4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trpm6Q8CIR4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trpm6Q8CIR4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trpm6Q8CIR4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trpm6Q8CIR4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trpm6Q8CIR4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trpm6Q8CIR4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trpm6Q8CIR4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trpm6Q8CIR4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trpm6Q8CIR4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.48■□□□□ 0.39
Trpm6Q8CIR4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trpm6Q8CIR4 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trpm6Q8CIR4 Mir8112-201ENSMUST00000184382 131 ntBASIC17.48■□□□□ 0.39
Trpm6Q8CIR4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trpm6Q8CIR4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trpm6Q8CIR4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trpm6Q8CIR4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trpm6Q8CIR4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.48■□□□□ 0.39
Trpm6Q8CIR4 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.48■□□□□ 0.39
Trpm6Q8CIR4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trpm6Q8CIR4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trpm6Q8CIR4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trpm6Q8CIR4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trpm6Q8CIR4 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.47■□□□□ 0.39
Trpm6Q8CIR4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trpm6Q8CIR4 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Trpm6Q8CIR4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trpm6Q8CIR4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trpm6Q8CIR4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trpm6Q8CIR4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trpm6Q8CIR4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trpm6Q8CIR4 Actl10-202ENSMUST00000226583 1501 ntBASIC17.47■□□□□ 0.39
Trpm6Q8CIR4 Gm11355-201ENSMUST00000121120 306 ntBASIC17.47■□□□□ 0.39
Trpm6Q8CIR4 Gm17808-201ENSMUST00000200859 894 ntBASIC17.47■□□□□ 0.39
Trpm6Q8CIR4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trpm6Q8CIR4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trpm6Q8CIR4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trpm6Q8CIR4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trpm6Q8CIR4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trpm6Q8CIR4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trpm6Q8CIR4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trpm6Q8CIR4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trpm6Q8CIR4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Trpm6Q8CIR4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trpm6Q8CIR4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.46■□□□□ 0.39
Trpm6Q8CIR4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Trpm6Q8CIR4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trpm6Q8CIR4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.45■□□□□ 0.38
Trpm6Q8CIR4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trpm6Q8CIR4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trpm6Q8CIR4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trpm6Q8CIR4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trpm6Q8CIR4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trpm6Q8CIR4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trpm6Q8CIR4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trpm6Q8CIR4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trpm6Q8CIR4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trpm6Q8CIR4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trpm6Q8CIR4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trpm6Q8CIR4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Trpm6Q8CIR4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trpm6Q8CIR4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.44■□□□□ 0.38
Trpm6Q8CIR4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trpm6Q8CIR4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Trpm6Q8CIR4 Gm17807-201ENSMUST00000186869 298 ntBASIC17.44■□□□□ 0.38
Trpm6Q8CIR4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trpm6Q8CIR4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trpm6Q8CIR4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trpm6Q8CIR4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trpm6Q8CIR4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trpm6Q8CIR4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trpm6Q8CIR4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trpm6Q8CIR4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trpm6Q8CIR4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trpm6Q8CIR4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms