Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim5Q8CI51 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.04■□□□□ 0.16
Pdlim5Q8CI51 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim5Q8CI51 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim5Q8CI51 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim5Q8CI51 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim5Q8CI51 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim5Q8CI51 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim5Q8CI51 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.04■□□□□ 0.16
Pdlim5Q8CI51 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Pdlim5Q8CI51 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim5Q8CI51 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim5Q8CI51 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim5Q8CI51 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim5Q8CI51 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim5Q8CI51 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim5Q8CI51 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim5Q8CI51 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.03■□□□□ 0.16
Pdlim5Q8CI51 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim5Q8CI51 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pdlim5Q8CI51 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim5Q8CI51 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pdlim5Q8CI51 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pdlim5Q8CI51 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pdlim5Q8CI51 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pdlim5Q8CI51 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pdlim5Q8CI51 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pdlim5Q8CI51 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.02■□□□□ 0.16
Pdlim5Q8CI51 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Pdlim5Q8CI51 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Pdlim5Q8CI51 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Pdlim5Q8CI51 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.02■□□□□ 0.16
Pdlim5Q8CI51 Gm11643-201ENSMUST00000119578 864 ntBASIC16.02■□□□□ 0.16
Pdlim5Q8CI51 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.02■□□□□ 0.16
Pdlim5Q8CI51 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pdlim5Q8CI51 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Pdlim5Q8CI51 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pdlim5Q8CI51 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pdlim5Q8CI51 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Pdlim5Q8CI51 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pdlim5Q8CI51 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.01■□□□□ 0.15
Pdlim5Q8CI51 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pdlim5Q8CI51 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pdlim5Q8CI51 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pdlim5Q8CI51 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pdlim5Q8CI51 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Pdlim5Q8CI51 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16■□□□□ 0.15
Pdlim5Q8CI51 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pdlim5Q8CI51 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16■□□□□ 0.15
Pdlim5Q8CI51 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pdlim5Q8CI51 Gm12896-201ENSMUST00000118430 226 ntBASIC16■□□□□ 0.15
Pdlim5Q8CI51 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pdlim5Q8CI51 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16■□□□□ 0.15
Pdlim5Q8CI51 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16■□□□□ 0.15
Pdlim5Q8CI51 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16■□□□□ 0.15
Pdlim5Q8CI51 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16■□□□□ 0.15
Pdlim5Q8CI51 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pdlim5Q8CI51 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Pdlim5Q8CI51 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pdlim5Q8CI51 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pdlim5Q8CI51 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pdlim5Q8CI51 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pdlim5Q8CI51 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pdlim5Q8CI51 Gm37166-201ENSMUST00000195473 2474 ntBASIC16■□□□□ 0.15
Pdlim5Q8CI51 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pdlim5Q8CI51 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pdlim5Q8CI51 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.99■□□□□ 0.15
Pdlim5Q8CI51 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms