Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rdh1Q8CGV4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rdh1Q8CGV4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rdh1Q8CGV4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rdh1Q8CGV4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rdh1Q8CGV4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rdh1Q8CGV4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rdh1Q8CGV4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rdh1Q8CGV4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rdh1Q8CGV4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.94■□□□□ 0.3
Rdh1Q8CGV4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rdh1Q8CGV4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rdh1Q8CGV4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rdh1Q8CGV4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Rdh1Q8CGV4 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.94■□□□□ 0.3
Rdh1Q8CGV4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rdh1Q8CGV4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.93■□□□□ 0.3
Rdh1Q8CGV4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rdh1Q8CGV4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rdh1Q8CGV4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rdh1Q8CGV4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Rdh1Q8CGV4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.93■□□□□ 0.3
Rdh1Q8CGV4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rdh1Q8CGV4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rdh1Q8CGV4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rdh1Q8CGV4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Rdh1Q8CGV4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rdh1Q8CGV4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Rdh1Q8CGV4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Rdh1Q8CGV4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rdh1Q8CGV4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rdh1Q8CGV4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rdh1Q8CGV4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rdh1Q8CGV4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rdh1Q8CGV4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rdh1Q8CGV4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rdh1Q8CGV4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.92■□□□□ 0.3
Rdh1Q8CGV4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.92■□□□□ 0.3
Rdh1Q8CGV4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rdh1Q8CGV4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.92■□□□□ 0.3
Rdh1Q8CGV4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Rdh1Q8CGV4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.92■□□□□ 0.3
Rdh1Q8CGV4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rdh1Q8CGV4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rdh1Q8CGV4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rdh1Q8CGV4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rdh1Q8CGV4 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rdh1Q8CGV4 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rdh1Q8CGV4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rdh1Q8CGV4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rdh1Q8CGV4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rdh1Q8CGV4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rdh1Q8CGV4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rdh1Q8CGV4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rdh1Q8CGV4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rdh1Q8CGV4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.91■□□□□ 0.3
Rdh1Q8CGV4 Il3ra-202ENSMUST00000223589 738 ntBASIC16.91■□□□□ 0.3
Rdh1Q8CGV4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rdh1Q8CGV4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rdh1Q8CGV4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rdh1Q8CGV4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.91■□□□□ 0.3
Rdh1Q8CGV4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rdh1Q8CGV4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Rdh1Q8CGV4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rdh1Q8CGV4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.91■□□□□ 0.3
Rdh1Q8CGV4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rdh1Q8CGV4 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rdh1Q8CGV4 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rdh1Q8CGV4 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.9■□□□□ 0.3
Rdh1Q8CGV4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.9■□□□□ 0.3
Rdh1Q8CGV4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rdh1Q8CGV4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rdh1Q8CGV4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rdh1Q8CGV4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rdh1Q8CGV4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rdh1Q8CGV4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rdh1Q8CGV4 Gm16061-201ENSMUST00000122167 857 ntBASIC16.9■□□□□ 0.3
Rdh1Q8CGV4 Gm17661-201ENSMUST00000170317 270 ntBASIC16.9■□□□□ 0.3
Rdh1Q8CGV4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rdh1Q8CGV4 Gm18032-201ENSMUST00000222541 538 ntBASIC16.9■□□□□ 0.3
Rdh1Q8CGV4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.9■□□□□ 0.3
Rdh1Q8CGV4 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.9■□□□□ 0.3
Rdh1Q8CGV4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rdh1Q8CGV4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rdh1Q8CGV4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rdh1Q8CGV4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rdh1Q8CGV4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rdh1Q8CGV4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rdh1Q8CGV4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rdh1Q8CGV4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rdh1Q8CGV4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rdh1Q8CGV4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rdh1Q8CGV4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rdh1Q8CGV4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rdh1Q8CGV4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rdh1Q8CGV4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rdh1Q8CGV4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Rdh1Q8CGV4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.89■□□□□ 0.29
Rdh1Q8CGV4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.89■□□□□ 0.29
Rdh1Q8CGV4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms