Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rp1l1Q8CGM2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rp1l1Q8CGM2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rp1l1Q8CGM2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rp1l1Q8CGM2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rp1l1Q8CGM2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.14■□□□□ 0.49
Rp1l1Q8CGM2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.14■□□□□ 0.49
Rp1l1Q8CGM2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rp1l1Q8CGM2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rp1l1Q8CGM2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rp1l1Q8CGM2 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.14■□□□□ 0.49
Rp1l1Q8CGM2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rp1l1Q8CGM2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rp1l1Q8CGM2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rp1l1Q8CGM2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Rp1l1Q8CGM2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.13■□□□□ 0.49
Rp1l1Q8CGM2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rp1l1Q8CGM2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.13■□□□□ 0.49
Rp1l1Q8CGM2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rp1l1Q8CGM2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rp1l1Q8CGM2 Gm10052-201ENSMUST00000168019 960 ntBASIC18.13■□□□□ 0.49
Rp1l1Q8CGM2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rp1l1Q8CGM2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.13■□□□□ 0.49
Rp1l1Q8CGM2 Gm7729-201ENSMUST00000050143 801 ntBASIC18.13■□□□□ 0.49
Rp1l1Q8CGM2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rp1l1Q8CGM2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rp1l1Q8CGM2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rp1l1Q8CGM2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rp1l1Q8CGM2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rp1l1Q8CGM2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rp1l1Q8CGM2 Idnk-204ENSMUST00000226010 1898 ntBASIC18.13■□□□□ 0.49
Rp1l1Q8CGM2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rp1l1Q8CGM2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rp1l1Q8CGM2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rp1l1Q8CGM2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rp1l1Q8CGM2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rp1l1Q8CGM2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rp1l1Q8CGM2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rp1l1Q8CGM2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.12■□□□□ 0.49
Rp1l1Q8CGM2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rp1l1Q8CGM2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Rp1l1Q8CGM2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rp1l1Q8CGM2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rp1l1Q8CGM2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rp1l1Q8CGM2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rp1l1Q8CGM2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rp1l1Q8CGM2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Rp1l1Q8CGM2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rp1l1Q8CGM2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rp1l1Q8CGM2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rp1l1Q8CGM2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.11■□□□□ 0.49
Rp1l1Q8CGM2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rp1l1Q8CGM2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rp1l1Q8CGM2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.11■□□□□ 0.49
Rp1l1Q8CGM2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Rp1l1Q8CGM2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rp1l1Q8CGM2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rp1l1Q8CGM2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rp1l1Q8CGM2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rp1l1Q8CGM2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rp1l1Q8CGM2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rp1l1Q8CGM2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rp1l1Q8CGM2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rp1l1Q8CGM2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.11■□□□□ 0.49
Rp1l1Q8CGM2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rp1l1Q8CGM2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rp1l1Q8CGM2 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.1■□□□□ 0.49
Rp1l1Q8CGM2 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rp1l1Q8CGM2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.1■□□□□ 0.49
Rp1l1Q8CGM2 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.1■□□□□ 0.49
Rp1l1Q8CGM2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rp1l1Q8CGM2 Golph3-205ENSMUST00000228671 2842 ntBASIC18.1■□□□□ 0.49
Rp1l1Q8CGM2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.1■□□□□ 0.49
Rp1l1Q8CGM2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.1■□□□□ 0.49
Rp1l1Q8CGM2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rp1l1Q8CGM2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rp1l1Q8CGM2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rp1l1Q8CGM2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rp1l1Q8CGM2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rp1l1Q8CGM2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.09■□□□□ 0.49
Rp1l1Q8CGM2 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.09■□□□□ 0.49
Rp1l1Q8CGM2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rp1l1Q8CGM2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rp1l1Q8CGM2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rp1l1Q8CGM2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rp1l1Q8CGM2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rp1l1Q8CGM2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rp1l1Q8CGM2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rp1l1Q8CGM2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rp1l1Q8CGM2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.09■□□□□ 0.49
Rp1l1Q8CGM2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.09■□□□□ 0.49
Rp1l1Q8CGM2 Gm18195-201ENSMUST00000207604 706 ntBASIC18.09■□□□□ 0.49
Rp1l1Q8CGM2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.09■□□□□ 0.49
Rp1l1Q8CGM2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rp1l1Q8CGM2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rp1l1Q8CGM2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rp1l1Q8CGM2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rp1l1Q8CGM2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rp1l1Q8CGM2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rp1l1Q8CGM2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms