Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Smc4Q8CG47 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smc4Q8CG47 Gm43272-201ENSMUST00000200599 1584 ntBASIC21.51■■□□□ 1.03
Smc4Q8CG47 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smc4Q8CG47 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smc4Q8CG47 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Smc4Q8CG47 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Smc4Q8CG47 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Smc4Q8CG47 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Smc4Q8CG47 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smc4Q8CG47 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smc4Q8CG47 Mir5130-201ENSMUST00000175160 84 ntBASIC21.5■■□□□ 1.03
Smc4Q8CG47 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC21.5■■□□□ 1.03
Smc4Q8CG47 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Smc4Q8CG47 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smc4Q8CG47 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smc4Q8CG47 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smc4Q8CG47 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Smc4Q8CG47 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Smc4Q8CG47 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smc4Q8CG47 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smc4Q8CG47 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Smc4Q8CG47 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smc4Q8CG47 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Smc4Q8CG47 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smc4Q8CG47 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smc4Q8CG47 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smc4Q8CG47 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smc4Q8CG47 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC21.49■■□□□ 1.03
Smc4Q8CG47 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.49■■□□□ 1.03
Smc4Q8CG47 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Smc4Q8CG47 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smc4Q8CG47 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Smc4Q8CG47 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Smc4Q8CG47 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Smc4Q8CG47 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smc4Q8CG47 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smc4Q8CG47 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
Smc4Q8CG47 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smc4Q8CG47 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smc4Q8CG47 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smc4Q8CG47 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Smc4Q8CG47 Il3ra-202ENSMUST00000223589 738 ntBASIC21.48■■□□□ 1.03
Smc4Q8CG47 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smc4Q8CG47 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Smc4Q8CG47 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.48■■□□□ 1.03
Smc4Q8CG47 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smc4Q8CG47 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
Smc4Q8CG47 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smc4Q8CG47 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smc4Q8CG47 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Smc4Q8CG47 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smc4Q8CG47 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC21.47■■□□□ 1.03
Smc4Q8CG47 Gm16061-201ENSMUST00000122167 857 ntBASIC21.47■■□□□ 1.03
Smc4Q8CG47 Gm13474-201ENSMUST00000122466 815 ntBASIC21.47■■□□□ 1.03
Smc4Q8CG47 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Smc4Q8CG47 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Smc4Q8CG47 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smc4Q8CG47 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Smc4Q8CG47 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.46■■□□□ 1.03
Smc4Q8CG47 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC21.46■■□□□ 1.03
Smc4Q8CG47 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Smc4Q8CG47 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smc4Q8CG47 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.46■■□□□ 1.03
Smc4Q8CG47 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smc4Q8CG47 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Smc4Q8CG47 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.46■■□□□ 1.03
Smc4Q8CG47 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smc4Q8CG47 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smc4Q8CG47 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Smc4Q8CG47 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Smc4Q8CG47 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
Smc4Q8CG47 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smc4Q8CG47 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smc4Q8CG47 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.45■■□□□ 1.02
Smc4Q8CG47 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Smc4Q8CG47 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.45■■□□□ 1.02
Smc4Q8CG47 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smc4Q8CG47 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smc4Q8CG47 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smc4Q8CG47 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smc4Q8CG47 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Smc4Q8CG47 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smc4Q8CG47 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smc4Q8CG47 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Smc4Q8CG47 Gm17661-201ENSMUST00000170317 270 ntBASIC21.44■■□□□ 1.02
Smc4Q8CG47 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.44■■□□□ 1.02
Smc4Q8CG47 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smc4Q8CG47 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smc4Q8CG47 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Smc4Q8CG47 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smc4Q8CG47 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Smc4Q8CG47 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smc4Q8CG47 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Smc4Q8CG47 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smc4Q8CG47 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smc4Q8CG47 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smc4Q8CG47 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Smc4Q8CG47 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smc4Q8CG47 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 234 ms