Protein–RNA interactions for Protein: Q8CFD4

Snx8, Sorting nexin-8, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx8Q8CFD4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx8Q8CFD4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx8Q8CFD4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Snx8Q8CFD4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.28■□□□□ 0.36
Snx8Q8CFD4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Snx8Q8CFD4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx8Q8CFD4 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx8Q8CFD4 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.28■□□□□ 0.36
Snx8Q8CFD4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx8Q8CFD4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Snx8Q8CFD4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx8Q8CFD4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx8Q8CFD4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx8Q8CFD4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx8Q8CFD4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx8Q8CFD4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx8Q8CFD4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx8Q8CFD4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx8Q8CFD4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx8Q8CFD4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx8Q8CFD4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx8Q8CFD4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx8Q8CFD4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx8Q8CFD4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Snx8Q8CFD4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snx8Q8CFD4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Snx8Q8CFD4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snx8Q8CFD4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Snx8Q8CFD4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snx8Q8CFD4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx8Q8CFD4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
Snx8Q8CFD4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx8Q8CFD4 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.26■□□□□ 0.35
Snx8Q8CFD4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx8Q8CFD4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Snx8Q8CFD4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx8Q8CFD4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx8Q8CFD4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx8Q8CFD4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Snx8Q8CFD4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.26■□□□□ 0.35
Snx8Q8CFD4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Snx8Q8CFD4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.26■□□□□ 0.35
Snx8Q8CFD4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx8Q8CFD4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx8Q8CFD4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Snx8Q8CFD4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.26■□□□□ 0.35
Snx8Q8CFD4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx8Q8CFD4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx8Q8CFD4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx8Q8CFD4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx8Q8CFD4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx8Q8CFD4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx8Q8CFD4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx8Q8CFD4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx8Q8CFD4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx8Q8CFD4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx8Q8CFD4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx8Q8CFD4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Snx8Q8CFD4 Gm37856-201ENSMUST00000191634 999 ntBASIC17.25■□□□□ 0.35
Snx8Q8CFD4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.25■□□□□ 0.35
Snx8Q8CFD4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx8Q8CFD4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx8Q8CFD4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.25■□□□□ 0.35
Snx8Q8CFD4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx8Q8CFD4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx8Q8CFD4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Snx8Q8CFD4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.24■□□□□ 0.35
Snx8Q8CFD4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx8Q8CFD4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx8Q8CFD4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx8Q8CFD4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx8Q8CFD4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.24■□□□□ 0.35
Snx8Q8CFD4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.24■□□□□ 0.35
Snx8Q8CFD4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx8Q8CFD4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Snx8Q8CFD4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Snx8Q8CFD4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx8Q8CFD4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx8Q8CFD4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx8Q8CFD4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Snx8Q8CFD4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx8Q8CFD4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx8Q8CFD4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.24■□□□□ 0.35
Snx8Q8CFD4 Idnk-204ENSMUST00000226010 1898 ntBASIC17.24■□□□□ 0.35
Snx8Q8CFD4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx8Q8CFD4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx8Q8CFD4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Snx8Q8CFD4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx8Q8CFD4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Snx8Q8CFD4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Snx8Q8CFD4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snx8Q8CFD4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Snx8Q8CFD4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snx8Q8CFD4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snx8Q8CFD4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snx8Q8CFD4 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snx8Q8CFD4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snx8Q8CFD4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snx8Q8CFD4 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snx8Q8CFD4 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms