Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Vps53Q8CCB4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps53Q8CCB4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.29■□□□□ 0.84
Vps53Q8CCB4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vps53Q8CCB4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.29■□□□□ 0.84
Vps53Q8CCB4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Vps53Q8CCB4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vps53Q8CCB4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps53Q8CCB4 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.29■□□□□ 0.84
Vps53Q8CCB4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Vps53Q8CCB4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps53Q8CCB4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps53Q8CCB4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps53Q8CCB4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps53Q8CCB4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps53Q8CCB4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps53Q8CCB4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps53Q8CCB4 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps53Q8CCB4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vps53Q8CCB4 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.28■□□□□ 0.84
Vps53Q8CCB4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps53Q8CCB4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps53Q8CCB4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps53Q8CCB4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps53Q8CCB4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps53Q8CCB4 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Vps53Q8CCB4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps53Q8CCB4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps53Q8CCB4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps53Q8CCB4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.28■□□□□ 0.84
Vps53Q8CCB4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vps53Q8CCB4 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps53Q8CCB4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps53Q8CCB4 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps53Q8CCB4 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Vps53Q8CCB4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps53Q8CCB4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vps53Q8CCB4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps53Q8CCB4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps53Q8CCB4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps53Q8CCB4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps53Q8CCB4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.27■□□□□ 0.84
Vps53Q8CCB4 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vps53Q8CCB4 Gm6433-201ENSMUST00000118634 875 ntBASIC20.27■□□□□ 0.84
Vps53Q8CCB4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.27■□□□□ 0.84
Vps53Q8CCB4 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps53Q8CCB4 Gm5417-201ENSMUST00000079706 384 ntBASIC20.27■□□□□ 0.84
Vps53Q8CCB4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps53Q8CCB4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Vps53Q8CCB4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vps53Q8CCB4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps53Q8CCB4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps53Q8CCB4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Vps53Q8CCB4 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Vps53Q8CCB4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Vps53Q8CCB4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Vps53Q8CCB4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Vps53Q8CCB4 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Vps53Q8CCB4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps53Q8CCB4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps53Q8CCB4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vps53Q8CCB4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps53Q8CCB4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Vps53Q8CCB4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.26■□□□□ 0.83
Vps53Q8CCB4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps53Q8CCB4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps53Q8CCB4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps53Q8CCB4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vps53Q8CCB4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vps53Q8CCB4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps53Q8CCB4 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.25■□□□□ 0.83
Vps53Q8CCB4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps53Q8CCB4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vps53Q8CCB4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps53Q8CCB4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vps53Q8CCB4 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps53Q8CCB4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vps53Q8CCB4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vps53Q8CCB4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Vps53Q8CCB4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vps53Q8CCB4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps53Q8CCB4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Vps53Q8CCB4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vps53Q8CCB4 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps53Q8CCB4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps53Q8CCB4 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.24■□□□□ 0.83
Vps53Q8CCB4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps53Q8CCB4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps53Q8CCB4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Vps53Q8CCB4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps53Q8CCB4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Vps53Q8CCB4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps53Q8CCB4 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps53Q8CCB4 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps53Q8CCB4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps53Q8CCB4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Vps53Q8CCB4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps53Q8CCB4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps53Q8CCB4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps53Q8CCB4 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms