Protein–RNA interactions for Protein: Q8CC27

Cacnb2, Voltage-dependent L-type calcium channel subunit beta-2, mousemouse

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb2Q8CC27 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb2Q8CC27 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.96■□□□□ 0.47
Cacnb2Q8CC27 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb2Q8CC27 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb2Q8CC27 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb2Q8CC27 AA414768-201ENSMUST00000121924 1257 ntBASIC17.96■□□□□ 0.47
Cacnb2Q8CC27 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb2Q8CC27 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.96■□□□□ 0.47
Cacnb2Q8CC27 Gm6345-202ENSMUST00000180900 204 ntBASIC17.96■□□□□ 0.47
Cacnb2Q8CC27 Gm18101-201ENSMUST00000215769 548 ntBASIC17.96■□□□□ 0.47
Cacnb2Q8CC27 Gm7370-201ENSMUST00000219471 767 ntBASIC17.96■□□□□ 0.47
Cacnb2Q8CC27 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb2Q8CC27 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cacnb2Q8CC27 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.96■□□□□ 0.47
Cacnb2Q8CC27 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb2Q8CC27 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Cacnb2Q8CC27 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb2Q8CC27 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cacnb2Q8CC27 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cacnb2Q8CC27 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacnb2Q8CC27 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacnb2Q8CC27 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cacnb2Q8CC27 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cacnb2Q8CC27 Idnk-204ENSMUST00000226010 1898 ntBASIC17.95■□□□□ 0.46
Cacnb2Q8CC27 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.95■□□□□ 0.46
Cacnb2Q8CC27 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacnb2Q8CC27 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cacnb2Q8CC27 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacnb2Q8CC27 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.95■□□□□ 0.46
Cacnb2Q8CC27 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cacnb2Q8CC27 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacnb2Q8CC27 Gm10819-201ENSMUST00000099988 561 ntBASIC17.95■□□□□ 0.46
Cacnb2Q8CC27 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacnb2Q8CC27 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.95■□□□□ 0.46
Cacnb2Q8CC27 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cacnb2Q8CC27 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacnb2Q8CC27 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.95■□□□□ 0.46
Cacnb2Q8CC27 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacnb2Q8CC27 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacnb2Q8CC27 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacnb2Q8CC27 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacnb2Q8CC27 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Cacnb2Q8CC27 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacnb2Q8CC27 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacnb2Q8CC27 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Cacnb2Q8CC27 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacnb2Q8CC27 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Cacnb2Q8CC27 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Cacnb2Q8CC27 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cacnb2Q8CC27 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.94■□□□□ 0.46
Cacnb2Q8CC27 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.94■□□□□ 0.46
Cacnb2Q8CC27 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cacnb2Q8CC27 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.94■□□□□ 0.46
Cacnb2Q8CC27 Gm7367-201ENSMUST00000057611 492 ntBASIC17.94■□□□□ 0.46
Cacnb2Q8CC27 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacnb2Q8CC27 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacnb2Q8CC27 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacnb2Q8CC27 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Cacnb2Q8CC27 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacnb2Q8CC27 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacnb2Q8CC27 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Cacnb2Q8CC27 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacnb2Q8CC27 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacnb2Q8CC27 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.93■□□□□ 0.46
Cacnb2Q8CC27 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
Cacnb2Q8CC27 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacnb2Q8CC27 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cacnb2Q8CC27 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cacnb2Q8CC27 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cacnb2Q8CC27 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cacnb2Q8CC27 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cacnb2Q8CC27 Gm37025-201ENSMUST00000195159 829 ntBASIC17.93■□□□□ 0.46
Cacnb2Q8CC27 Gm9731-201ENSMUST00000209480 747 ntBASIC17.93■□□□□ 0.46
Cacnb2Q8CC27 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cacnb2Q8CC27 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacnb2Q8CC27 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacnb2Q8CC27 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacnb2Q8CC27 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacnb2Q8CC27 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacnb2Q8CC27 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cacnb2Q8CC27 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cacnb2Q8CC27 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacnb2Q8CC27 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cacnb2Q8CC27 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Cacnb2Q8CC27 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacnb2Q8CC27 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacnb2Q8CC27 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cacnb2Q8CC27 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.92■□□□□ 0.46
Cacnb2Q8CC27 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cacnb2Q8CC27 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacnb2Q8CC27 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Cacnb2Q8CC27 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cacnb2Q8CC27 Il3ra-202ENSMUST00000223589 738 ntBASIC17.92■□□□□ 0.46
Cacnb2Q8CC27 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacnb2Q8CC27 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cacnb2Q8CC27 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacnb2Q8CC27 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacnb2Q8CC27 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cacnb2Q8CC27 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacnb2Q8CC27 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms