Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.33■□□□□ 0.85
Shisa4Q8CA71 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Shisa4Q8CA71 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Shisa4Q8CA71 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Shisa4Q8CA71 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.33■□□□□ 0.84
Shisa4Q8CA71 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Shisa4Q8CA71 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.33■□□□□ 0.84
Shisa4Q8CA71 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Shisa4Q8CA71 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shisa4Q8CA71 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Shisa4Q8CA71 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Shisa4Q8CA71 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.32■□□□□ 0.84
Shisa4Q8CA71 Gm30025-201ENSMUST00000218555 728 ntBASIC20.32■□□□□ 0.84
Shisa4Q8CA71 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Shisa4Q8CA71 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shisa4Q8CA71 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Shisa4Q8CA71 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Shisa4Q8CA71 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shisa4Q8CA71 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.32■□□□□ 0.84
Shisa4Q8CA71 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shisa4Q8CA71 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shisa4Q8CA71 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.31■□□□□ 0.84
Shisa4Q8CA71 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shisa4Q8CA71 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.31■□□□□ 0.84
Shisa4Q8CA71 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shisa4Q8CA71 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shisa4Q8CA71 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shisa4Q8CA71 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
Shisa4Q8CA71 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shisa4Q8CA71 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shisa4Q8CA71 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.31■□□□□ 0.84
Shisa4Q8CA71 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Shisa4Q8CA71 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Shisa4Q8CA71 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Shisa4Q8CA71 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shisa4Q8CA71 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shisa4Q8CA71 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shisa4Q8CA71 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Shisa4Q8CA71 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.3■□□□□ 0.84
Shisa4Q8CA71 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.3■□□□□ 0.84
Shisa4Q8CA71 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.3■□□□□ 0.84
Shisa4Q8CA71 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.3■□□□□ 0.84
Shisa4Q8CA71 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shisa4Q8CA71 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shisa4Q8CA71 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.3■□□□□ 0.84
Shisa4Q8CA71 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shisa4Q8CA71 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shisa4Q8CA71 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Shisa4Q8CA71 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shisa4Q8CA71 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shisa4Q8CA71 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shisa4Q8CA71 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.3■□□□□ 0.84
Shisa4Q8CA71 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Shisa4Q8CA71 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Shisa4Q8CA71 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Shisa4Q8CA71 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Shisa4Q8CA71 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.29■□□□□ 0.84
Shisa4Q8CA71 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.29■□□□□ 0.84
Shisa4Q8CA71 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shisa4Q8CA71 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shisa4Q8CA71 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shisa4Q8CA71 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shisa4Q8CA71 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shisa4Q8CA71 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.28■□□□□ 0.84
Shisa4Q8CA71 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shisa4Q8CA71 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Shisa4Q8CA71 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.28■□□□□ 0.84
Shisa4Q8CA71 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shisa4Q8CA71 Gm17661-201ENSMUST00000170317 270 ntBASIC20.28■□□□□ 0.84
Shisa4Q8CA71 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Shisa4Q8CA71 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Shisa4Q8CA71 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shisa4Q8CA71 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shisa4Q8CA71 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.28■□□□□ 0.84
Shisa4Q8CA71 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.28■□□□□ 0.84
Shisa4Q8CA71 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shisa4Q8CA71 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shisa4Q8CA71 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Shisa4Q8CA71 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Shisa4Q8CA71 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Shisa4Q8CA71 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shisa4Q8CA71 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shisa4Q8CA71 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shisa4Q8CA71 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shisa4Q8CA71 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shisa4Q8CA71 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shisa4Q8CA71 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Shisa4Q8CA71 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Shisa4Q8CA71 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Shisa4Q8CA71 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.27■□□□□ 0.84
Shisa4Q8CA71 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.27■□□□□ 0.84
Shisa4Q8CA71 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shisa4Q8CA71 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shisa4Q8CA71 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shisa4Q8CA71 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shisa4Q8CA71 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Shisa4Q8CA71 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.27■□□□□ 0.83
Shisa4Q8CA71 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Shisa4Q8CA71 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Shisa4Q8CA71 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms