Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim9Q8C7M3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim9Q8C7M3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim9Q8C7M3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim9Q8C7M3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trim9Q8C7M3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim9Q8C7M3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim9Q8C7M3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim9Q8C7M3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim9Q8C7M3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim9Q8C7M3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim9Q8C7M3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.22■□□□□ 0.67
Trim9Q8C7M3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim9Q8C7M3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim9Q8C7M3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim9Q8C7M3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim9Q8C7M3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim9Q8C7M3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim9Q8C7M3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim9Q8C7M3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trim9Q8C7M3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim9Q8C7M3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim9Q8C7M3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim9Q8C7M3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trim9Q8C7M3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim9Q8C7M3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.21■□□□□ 0.67
Trim9Q8C7M3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.21■□□□□ 0.67
Trim9Q8C7M3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim9Q8C7M3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Trim9Q8C7M3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.21■□□□□ 0.67
Trim9Q8C7M3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.21■□□□□ 0.67
Trim9Q8C7M3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim9Q8C7M3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim9Q8C7M3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trim9Q8C7M3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim9Q8C7M3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim9Q8C7M3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim9Q8C7M3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
Trim9Q8C7M3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim9Q8C7M3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim9Q8C7M3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Trim9Q8C7M3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Trim9Q8C7M3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim9Q8C7M3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Trim9Q8C7M3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim9Q8C7M3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trim9Q8C7M3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim9Q8C7M3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim9Q8C7M3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim9Q8C7M3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim9Q8C7M3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim9Q8C7M3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim9Q8C7M3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim9Q8C7M3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trim9Q8C7M3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim9Q8C7M3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim9Q8C7M3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trim9Q8C7M3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim9Q8C7M3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim9Q8C7M3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Trim9Q8C7M3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim9Q8C7M3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim9Q8C7M3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.19■□□□□ 0.66
Trim9Q8C7M3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim9Q8C7M3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim9Q8C7M3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim9Q8C7M3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trim9Q8C7M3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim9Q8C7M3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim9Q8C7M3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim9Q8C7M3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim9Q8C7M3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim9Q8C7M3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim9Q8C7M3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Trim9Q8C7M3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim9Q8C7M3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trim9Q8C7M3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim9Q8C7M3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim9Q8C7M3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim9Q8C7M3 Gm24841-201ENSMUST00000158676 357 ntBASIC19.17■□□□□ 0.66
Trim9Q8C7M3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim9Q8C7M3 Gm27011-201ENSMUST00000182352 972 ntBASIC19.17■□□□□ 0.66
Trim9Q8C7M3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim9Q8C7M3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.17■□□□□ 0.66
Trim9Q8C7M3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Trim9Q8C7M3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.17■□□□□ 0.66
Trim9Q8C7M3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim9Q8C7M3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim9Q8C7M3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim9Q8C7M3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.17■□□□□ 0.66
Trim9Q8C7M3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim9Q8C7M3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim9Q8C7M3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim9Q8C7M3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.16■□□□□ 0.66
Trim9Q8C7M3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim9Q8C7M3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Trim9Q8C7M3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim9Q8C7M3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Trim9Q8C7M3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim9Q8C7M3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms