Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap54Q8C6S9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Cfap54Q8C6S9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Cfap54Q8C6S9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap54Q8C6S9 Gm24841-201ENSMUST00000158676 357 ntBASIC16.72■□□□□ 0.27
Cfap54Q8C6S9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.72■□□□□ 0.27
Cfap54Q8C6S9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap54Q8C6S9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap54Q8C6S9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap54Q8C6S9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap54Q8C6S9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap54Q8C6S9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap54Q8C6S9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap54Q8C6S9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap54Q8C6S9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.72■□□□□ 0.27
Cfap54Q8C6S9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.72■□□□□ 0.27
Cfap54Q8C6S9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Cfap54Q8C6S9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap54Q8C6S9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap54Q8C6S9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap54Q8C6S9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap54Q8C6S9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap54Q8C6S9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap54Q8C6S9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap54Q8C6S9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.71■□□□□ 0.27
Cfap54Q8C6S9 Gm9731-201ENSMUST00000209480 747 ntBASIC16.71■□□□□ 0.27
Cfap54Q8C6S9 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.71■□□□□ 0.27
Cfap54Q8C6S9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap54Q8C6S9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Cfap54Q8C6S9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cfap54Q8C6S9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.7■□□□□ 0.26
Cfap54Q8C6S9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.7■□□□□ 0.26
Cfap54Q8C6S9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cfap54Q8C6S9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfap54Q8C6S9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.7■□□□□ 0.26
Cfap54Q8C6S9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cfap54Q8C6S9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfap54Q8C6S9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfap54Q8C6S9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfap54Q8C6S9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfap54Q8C6S9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.7■□□□□ 0.26
Cfap54Q8C6S9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.7■□□□□ 0.26
Cfap54Q8C6S9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap54Q8C6S9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.69■□□□□ 0.26
Cfap54Q8C6S9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap54Q8C6S9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Cfap54Q8C6S9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.69■□□□□ 0.26
Cfap54Q8C6S9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap54Q8C6S9 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.69■□□□□ 0.26
Cfap54Q8C6S9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap54Q8C6S9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap54Q8C6S9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap54Q8C6S9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap54Q8C6S9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Cfap54Q8C6S9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap54Q8C6S9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap54Q8C6S9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Cfap54Q8C6S9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Cfap54Q8C6S9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap54Q8C6S9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap54Q8C6S9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap54Q8C6S9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cfap54Q8C6S9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Cfap54Q8C6S9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cfap54Q8C6S9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cfap54Q8C6S9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cfap54Q8C6S9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cfap54Q8C6S9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.68■□□□□ 0.26
Cfap54Q8C6S9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cfap54Q8C6S9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cfap54Q8C6S9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.68■□□□□ 0.26
Cfap54Q8C6S9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cfap54Q8C6S9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.68■□□□□ 0.26
Cfap54Q8C6S9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.68■□□□□ 0.26
Cfap54Q8C6S9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.68■□□□□ 0.26
Cfap54Q8C6S9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.68■□□□□ 0.26
Cfap54Q8C6S9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cfap54Q8C6S9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cfap54Q8C6S9 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.68■□□□□ 0.26
Cfap54Q8C6S9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cfap54Q8C6S9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.67■□□□□ 0.26
Cfap54Q8C6S9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cfap54Q8C6S9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cfap54Q8C6S9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.67■□□□□ 0.26
Cfap54Q8C6S9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cfap54Q8C6S9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cfap54Q8C6S9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cfap54Q8C6S9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.67■□□□□ 0.26
Cfap54Q8C6S9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Cfap54Q8C6S9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cfap54Q8C6S9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cfap54Q8C6S9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cfap54Q8C6S9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.67■□□□□ 0.26
Cfap54Q8C6S9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Cfap54Q8C6S9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cfap54Q8C6S9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cfap54Q8C6S9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cfap54Q8C6S9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cfap54Q8C6S9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cfap54Q8C6S9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms