Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp20Q8C6M1 AA414768-201ENSMUST00000121924 1257 ntBASIC19.25■□□□□ 0.67
Usp20Q8C6M1 Gm22697-201ENSMUST00000175194 63 ntBASIC19.25■□□□□ 0.67
Usp20Q8C6M1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp20Q8C6M1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.25■□□□□ 0.67
Usp20Q8C6M1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.25■□□□□ 0.67
Usp20Q8C6M1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp20Q8C6M1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp20Q8C6M1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp20Q8C6M1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp20Q8C6M1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp20Q8C6M1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp20Q8C6M1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp20Q8C6M1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Usp20Q8C6M1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Usp20Q8C6M1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp20Q8C6M1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp20Q8C6M1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Usp20Q8C6M1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp20Q8C6M1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp20Q8C6M1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp20Q8C6M1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp20Q8C6M1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp20Q8C6M1 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.23■□□□□ 0.67
Usp20Q8C6M1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.23■□□□□ 0.67
Usp20Q8C6M1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp20Q8C6M1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp20Q8C6M1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Usp20Q8C6M1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Usp20Q8C6M1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp20Q8C6M1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.23■□□□□ 0.67
Usp20Q8C6M1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp20Q8C6M1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp20Q8C6M1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp20Q8C6M1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp20Q8C6M1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp20Q8C6M1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.23■□□□□ 0.67
Usp20Q8C6M1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp20Q8C6M1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp20Q8C6M1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp20Q8C6M1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp20Q8C6M1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.22■□□□□ 0.67
Usp20Q8C6M1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp20Q8C6M1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp20Q8C6M1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp20Q8C6M1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp20Q8C6M1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp20Q8C6M1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp20Q8C6M1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp20Q8C6M1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Usp20Q8C6M1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp20Q8C6M1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp20Q8C6M1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp20Q8C6M1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp20Q8C6M1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp20Q8C6M1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp20Q8C6M1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Usp20Q8C6M1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp20Q8C6M1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.21■□□□□ 0.67
Usp20Q8C6M1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp20Q8C6M1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp20Q8C6M1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp20Q8C6M1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp20Q8C6M1 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp20Q8C6M1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp20Q8C6M1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp20Q8C6M1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp20Q8C6M1 Gm10418-201ENSMUST00000100943 576 ntBASIC19.2■□□□□ 0.66
Usp20Q8C6M1 Gm18101-201ENSMUST00000215769 548 ntBASIC19.2■□□□□ 0.66
Usp20Q8C6M1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp20Q8C6M1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp20Q8C6M1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Usp20Q8C6M1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp20Q8C6M1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp20Q8C6M1 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.2■□□□□ 0.66
Usp20Q8C6M1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp20Q8C6M1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp20Q8C6M1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp20Q8C6M1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp20Q8C6M1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp20Q8C6M1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp20Q8C6M1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp20Q8C6M1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.19■□□□□ 0.66
Usp20Q8C6M1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp20Q8C6M1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp20Q8C6M1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp20Q8C6M1 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.19■□□□□ 0.66
Usp20Q8C6M1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp20Q8C6M1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp20Q8C6M1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp20Q8C6M1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.19■□□□□ 0.66
Usp20Q8C6M1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp20Q8C6M1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp20Q8C6M1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp20Q8C6M1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp20Q8C6M1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp20Q8C6M1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.18■□□□□ 0.66
Usp20Q8C6M1 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.18■□□□□ 0.66
Usp20Q8C6M1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp20Q8C6M1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms