Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.61□□□□□ -0.07
Smim4Q8C1Q6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smim4Q8C1Q6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smim4Q8C1Q6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smim4Q8C1Q6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smim4Q8C1Q6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.6□□□□□ -0.07
Smim4Q8C1Q6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smim4Q8C1Q6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Smim4Q8C1Q6 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Smim4Q8C1Q6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Smim4Q8C1Q6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.6□□□□□ -0.07
Smim4Q8C1Q6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Smim4Q8C1Q6 Rab3c-203ENSMUST00000224180 967 ntBASIC14.6□□□□□ -0.07
Smim4Q8C1Q6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smim4Q8C1Q6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smim4Q8C1Q6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smim4Q8C1Q6 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Smim4Q8C1Q6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smim4Q8C1Q6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Gm26524-201ENSMUST00000192339 390 ntBASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smim4Q8C1Q6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.58□□□□□ -0.07
Smim4Q8C1Q6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Smim4Q8C1Q6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Smim4Q8C1Q6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smim4Q8C1Q6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smim4Q8C1Q6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smim4Q8C1Q6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smim4Q8C1Q6 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smim4Q8C1Q6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smim4Q8C1Q6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Smim4Q8C1Q6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms