Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek11Q8C0Q4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nek11Q8C0Q4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nek11Q8C0Q4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Nek11Q8C0Q4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek11Q8C0Q4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.66■□□□□ 0.9
Nek11Q8C0Q4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek11Q8C0Q4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.66■□□□□ 0.9
Nek11Q8C0Q4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nek11Q8C0Q4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nek11Q8C0Q4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nek11Q8C0Q4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nek11Q8C0Q4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nek11Q8C0Q4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nek11Q8C0Q4 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.65■□□□□ 0.9
Nek11Q8C0Q4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nek11Q8C0Q4 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nek11Q8C0Q4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nek11Q8C0Q4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nek11Q8C0Q4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nek11Q8C0Q4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nek11Q8C0Q4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nek11Q8C0Q4 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.65■□□□□ 0.9
Nek11Q8C0Q4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nek11Q8C0Q4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nek11Q8C0Q4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nek11Q8C0Q4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nek11Q8C0Q4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nek11Q8C0Q4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nek11Q8C0Q4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nek11Q8C0Q4 Gm38027-201ENSMUST00000192315 235 ntBASIC20.64■□□□□ 0.89
Nek11Q8C0Q4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.64■□□□□ 0.89
Nek11Q8C0Q4 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.64■□□□□ 0.89
Nek11Q8C0Q4 Odf3b-204ENSMUST00000227834 930 ntBASIC20.64■□□□□ 0.89
Nek11Q8C0Q4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nek11Q8C0Q4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nek11Q8C0Q4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nek11Q8C0Q4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
Nek11Q8C0Q4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nek11Q8C0Q4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nek11Q8C0Q4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nek11Q8C0Q4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.63■□□□□ 0.89
Nek11Q8C0Q4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nek11Q8C0Q4 Gm21814-202ENSMUST00000203277 873 ntBASIC20.63■□□□□ 0.89
Nek11Q8C0Q4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nek11Q8C0Q4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nek11Q8C0Q4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nek11Q8C0Q4 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nek11Q8C0Q4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nek11Q8C0Q4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Nek11Q8C0Q4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nek11Q8C0Q4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nek11Q8C0Q4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nek11Q8C0Q4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.62■□□□□ 0.89
Nek11Q8C0Q4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nek11Q8C0Q4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nek11Q8C0Q4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nek11Q8C0Q4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.62■□□□□ 0.89
Nek11Q8C0Q4 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Nek11Q8C0Q4 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.62■□□□□ 0.89
Nek11Q8C0Q4 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.62■□□□□ 0.89
Nek11Q8C0Q4 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.62■□□□□ 0.89
Nek11Q8C0Q4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.62■□□□□ 0.89
Nek11Q8C0Q4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nek11Q8C0Q4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Nek11Q8C0Q4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.61■□□□□ 0.89
Nek11Q8C0Q4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nek11Q8C0Q4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nek11Q8C0Q4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nek11Q8C0Q4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
Nek11Q8C0Q4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.61■□□□□ 0.89
Nek11Q8C0Q4 Gm3375-201ENSMUST00000203929 796 ntBASIC20.61■□□□□ 0.89
Nek11Q8C0Q4 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.61■□□□□ 0.89
Nek11Q8C0Q4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nek11Q8C0Q4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Nek11Q8C0Q4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nek11Q8C0Q4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nek11Q8C0Q4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nek11Q8C0Q4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Nek11Q8C0Q4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nek11Q8C0Q4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Nek11Q8C0Q4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nek11Q8C0Q4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nek11Q8C0Q4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.6■□□□□ 0.89
Nek11Q8C0Q4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nek11Q8C0Q4 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nek11Q8C0Q4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nek11Q8C0Q4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nek11Q8C0Q4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.6■□□□□ 0.89
Nek11Q8C0Q4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.6■□□□□ 0.89
Nek11Q8C0Q4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nek11Q8C0Q4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Nek11Q8C0Q4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.6■□□□□ 0.89
Nek11Q8C0Q4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nek11Q8C0Q4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nek11Q8C0Q4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nek11Q8C0Q4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nek11Q8C0Q4 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.59■□□□□ 0.89
Nek11Q8C0Q4 Gm37025-201ENSMUST00000195159 829 ntBASIC20.59■□□□□ 0.89
Nek11Q8C0Q4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms