Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trub1Q8C0D0 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.98■□□□□ 0.47
Trub1Q8C0D0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trub1Q8C0D0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trub1Q8C0D0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trub1Q8C0D0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trub1Q8C0D0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trub1Q8C0D0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trub1Q8C0D0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trub1Q8C0D0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.98■□□□□ 0.47
Trub1Q8C0D0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trub1Q8C0D0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trub1Q8C0D0 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.97■□□□□ 0.47
Trub1Q8C0D0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trub1Q8C0D0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Trub1Q8C0D0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trub1Q8C0D0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trub1Q8C0D0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.97■□□□□ 0.47
Trub1Q8C0D0 Gm4974-201ENSMUST00000209974 875 ntBASIC17.97■□□□□ 0.47
Trub1Q8C0D0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Trub1Q8C0D0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trub1Q8C0D0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trub1Q8C0D0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trub1Q8C0D0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trub1Q8C0D0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trub1Q8C0D0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trub1Q8C0D0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trub1Q8C0D0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.97■□□□□ 0.47
Trub1Q8C0D0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trub1Q8C0D0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trub1Q8C0D0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Trub1Q8C0D0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trub1Q8C0D0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.96■□□□□ 0.47
Trub1Q8C0D0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trub1Q8C0D0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trub1Q8C0D0 Gm10517-202ENSMUST00000192970 758 ntBASIC17.96■□□□□ 0.47
Trub1Q8C0D0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trub1Q8C0D0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trub1Q8C0D0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trub1Q8C0D0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trub1Q8C0D0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.96■□□□□ 0.47
Trub1Q8C0D0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trub1Q8C0D0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trub1Q8C0D0 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.96■□□□□ 0.47
Trub1Q8C0D0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.96■□□□□ 0.46
Trub1Q8C0D0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trub1Q8C0D0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trub1Q8C0D0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trub1Q8C0D0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trub1Q8C0D0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trub1Q8C0D0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trub1Q8C0D0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.95■□□□□ 0.46
Trub1Q8C0D0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trub1Q8C0D0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trub1Q8C0D0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trub1Q8C0D0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trub1Q8C0D0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.95■□□□□ 0.46
Trub1Q8C0D0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trub1Q8C0D0 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.95■□□□□ 0.46
Trub1Q8C0D0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trub1Q8C0D0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trub1Q8C0D0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trub1Q8C0D0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.95■□□□□ 0.46
Trub1Q8C0D0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trub1Q8C0D0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trub1Q8C0D0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trub1Q8C0D0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trub1Q8C0D0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Trub1Q8C0D0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trub1Q8C0D0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trub1Q8C0D0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trub1Q8C0D0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trub1Q8C0D0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.94■□□□□ 0.46
Trub1Q8C0D0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trub1Q8C0D0 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.94■□□□□ 0.46
Trub1Q8C0D0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trub1Q8C0D0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trub1Q8C0D0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.94■□□□□ 0.46
Trub1Q8C0D0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trub1Q8C0D0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trub1Q8C0D0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trub1Q8C0D0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trub1Q8C0D0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trub1Q8C0D0 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.94■□□□□ 0.46
Trub1Q8C0D0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trub1Q8C0D0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trub1Q8C0D0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Trub1Q8C0D0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trub1Q8C0D0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Trub1Q8C0D0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trub1Q8C0D0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trub1Q8C0D0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trub1Q8C0D0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trub1Q8C0D0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trub1Q8C0D0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trub1Q8C0D0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trub1Q8C0D0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trub1Q8C0D0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trub1Q8C0D0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.93■□□□□ 0.46
Trub1Q8C0D0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms