Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 Tgds-204ENSMUST00000228543 1594 ntBASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trerf1Q8BXJ2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trerf1Q8BXJ2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trerf1Q8BXJ2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trerf1Q8BXJ2 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.3■□□□□ 0.52
Trerf1Q8BXJ2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trerf1Q8BXJ2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trerf1Q8BXJ2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Trerf1Q8BXJ2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trerf1Q8BXJ2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trerf1Q8BXJ2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.3■□□□□ 0.52
Trerf1Q8BXJ2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.3■□□□□ 0.52
Trerf1Q8BXJ2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trerf1Q8BXJ2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trerf1Q8BXJ2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trerf1Q8BXJ2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trerf1Q8BXJ2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trerf1Q8BXJ2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.3■□□□□ 0.52
Trerf1Q8BXJ2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trerf1Q8BXJ2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.3■□□□□ 0.52
Trerf1Q8BXJ2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trerf1Q8BXJ2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trerf1Q8BXJ2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trerf1Q8BXJ2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trerf1Q8BXJ2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trerf1Q8BXJ2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trerf1Q8BXJ2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trerf1Q8BXJ2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Trerf1Q8BXJ2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trerf1Q8BXJ2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trerf1Q8BXJ2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trerf1Q8BXJ2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trerf1Q8BXJ2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trerf1Q8BXJ2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trerf1Q8BXJ2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trerf1Q8BXJ2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trerf1Q8BXJ2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.29■□□□□ 0.52
Trerf1Q8BXJ2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trerf1Q8BXJ2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trerf1Q8BXJ2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trerf1Q8BXJ2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trerf1Q8BXJ2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trerf1Q8BXJ2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
Trerf1Q8BXJ2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trerf1Q8BXJ2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trerf1Q8BXJ2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trerf1Q8BXJ2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Trerf1Q8BXJ2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trerf1Q8BXJ2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.28■□□□□ 0.52
Trerf1Q8BXJ2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trerf1Q8BXJ2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trerf1Q8BXJ2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trerf1Q8BXJ2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trerf1Q8BXJ2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trerf1Q8BXJ2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trerf1Q8BXJ2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trerf1Q8BXJ2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trerf1Q8BXJ2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trerf1Q8BXJ2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.28■□□□□ 0.52
Trerf1Q8BXJ2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trerf1Q8BXJ2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trerf1Q8BXJ2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.27■□□□□ 0.52
Trerf1Q8BXJ2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trerf1Q8BXJ2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Trerf1Q8BXJ2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Trerf1Q8BXJ2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.27■□□□□ 0.52
Trerf1Q8BXJ2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trerf1Q8BXJ2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trerf1Q8BXJ2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trerf1Q8BXJ2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trerf1Q8BXJ2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trerf1Q8BXJ2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trerf1Q8BXJ2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trerf1Q8BXJ2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms