Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ubr7Q8BU04 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubr7Q8BU04 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubr7Q8BU04 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubr7Q8BU04 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.6■□□□□ 0.41
Ubr7Q8BU04 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ubr7Q8BU04 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.6■□□□□ 0.41
Ubr7Q8BU04 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubr7Q8BU04 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubr7Q8BU04 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ubr7Q8BU04 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubr7Q8BU04 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
Ubr7Q8BU04 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubr7Q8BU04 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ubr7Q8BU04 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubr7Q8BU04 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ubr7Q8BU04 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubr7Q8BU04 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ubr7Q8BU04 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubr7Q8BU04 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ubr7Q8BU04 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ubr7Q8BU04 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubr7Q8BU04 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubr7Q8BU04 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.59■□□□□ 0.41
Ubr7Q8BU04 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubr7Q8BU04 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ubr7Q8BU04 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubr7Q8BU04 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubr7Q8BU04 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ubr7Q8BU04 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ubr7Q8BU04 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubr7Q8BU04 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubr7Q8BU04 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubr7Q8BU04 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.58■□□□□ 0.4
Ubr7Q8BU04 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.58■□□□□ 0.4
Ubr7Q8BU04 Gm7370-201ENSMUST00000219471 767 ntBASIC17.58■□□□□ 0.4
Ubr7Q8BU04 Gm18032-201ENSMUST00000222541 538 ntBASIC17.58■□□□□ 0.4
Ubr7Q8BU04 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.58■□□□□ 0.4
Ubr7Q8BU04 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.58■□□□□ 0.4
Ubr7Q8BU04 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubr7Q8BU04 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubr7Q8BU04 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubr7Q8BU04 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubr7Q8BU04 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubr7Q8BU04 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ubr7Q8BU04 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.57■□□□□ 0.4
Ubr7Q8BU04 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubr7Q8BU04 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubr7Q8BU04 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ubr7Q8BU04 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.57■□□□□ 0.4
Ubr7Q8BU04 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubr7Q8BU04 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubr7Q8BU04 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubr7Q8BU04 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubr7Q8BU04 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ubr7Q8BU04 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubr7Q8BU04 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.56■□□□□ 0.4
Ubr7Q8BU04 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ubr7Q8BU04 Gm16061-201ENSMUST00000122167 857 ntBASIC17.56■□□□□ 0.4
Ubr7Q8BU04 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ubr7Q8BU04 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubr7Q8BU04 Mir5130-201ENSMUST00000175160 84 ntBASIC17.56■□□□□ 0.4
Ubr7Q8BU04 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.56■□□□□ 0.4
Ubr7Q8BU04 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.56■□□□□ 0.4
Ubr7Q8BU04 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.56■□□□□ 0.4
Ubr7Q8BU04 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubr7Q8BU04 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Ubr7Q8BU04 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubr7Q8BU04 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubr7Q8BU04 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ubr7Q8BU04 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.56■□□□□ 0.4
Ubr7Q8BU04 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr7Q8BU04 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.55■□□□□ 0.4
Ubr7Q8BU04 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ubr7Q8BU04 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.55■□□□□ 0.4
Ubr7Q8BU04 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr7Q8BU04 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr7Q8BU04 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ubr7Q8BU04 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr7Q8BU04 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr7Q8BU04 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr7Q8BU04 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr7Q8BU04 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr7Q8BU04 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ubr7Q8BU04 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr7Q8BU04 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr7Q8BU04 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr7Q8BU04 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr7Q8BU04 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ubr7Q8BU04 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr7Q8BU04 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr7Q8BU04 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr7Q8BU04 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.54■□□□□ 0.4
Ubr7Q8BU04 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ubr7Q8BU04 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ubr7Q8BU04 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubr7Q8BU04 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubr7Q8BU04 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubr7Q8BU04 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.54■□□□□ 0.4
Ubr7Q8BU04 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms