Protein–RNA interactions for Protein: Q8BNE1

Tcaf1, TRPM8 channel-associated factor 1, mousemouse

Predictions only

Length 924 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcaf1Q8BNE1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tcaf1Q8BNE1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tcaf1Q8BNE1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.81■□□□□ 0.6
Tcaf1Q8BNE1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcaf1Q8BNE1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcaf1Q8BNE1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.81■□□□□ 0.6
Tcaf1Q8BNE1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tcaf1Q8BNE1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcaf1Q8BNE1 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.81■□□□□ 0.6
Tcaf1Q8BNE1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Tcaf1Q8BNE1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcaf1Q8BNE1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcaf1Q8BNE1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.81■□□□□ 0.6
Tcaf1Q8BNE1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Tcaf1Q8BNE1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcaf1Q8BNE1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Tcaf1Q8BNE1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcaf1Q8BNE1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcaf1Q8BNE1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tcaf1Q8BNE1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tcaf1Q8BNE1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tcaf1Q8BNE1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tcaf1Q8BNE1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tcaf1Q8BNE1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tcaf1Q8BNE1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Tcaf1Q8BNE1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.8■□□□□ 0.6
Tcaf1Q8BNE1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.8■□□□□ 0.6
Tcaf1Q8BNE1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.8■□□□□ 0.6
Tcaf1Q8BNE1 Gm27463-201ENSMUST00000183569 57 ntBASIC18.8■□□□□ 0.6
Tcaf1Q8BNE1 Gm37025-201ENSMUST00000195159 829 ntBASIC18.8■□□□□ 0.6
Tcaf1Q8BNE1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Tcaf1Q8BNE1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tcaf1Q8BNE1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tcaf1Q8BNE1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tcaf1Q8BNE1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tcaf1Q8BNE1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.8■□□□□ 0.6
Tcaf1Q8BNE1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcaf1Q8BNE1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tcaf1Q8BNE1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tcaf1Q8BNE1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcaf1Q8BNE1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcaf1Q8BNE1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.79■□□□□ 0.6
Tcaf1Q8BNE1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcaf1Q8BNE1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tcaf1Q8BNE1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tcaf1Q8BNE1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tcaf1Q8BNE1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcaf1Q8BNE1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.79■□□□□ 0.6
Tcaf1Q8BNE1 Rarb-207ENSMUST00000225921 2756 ntBASIC18.79■□□□□ 0.6
Tcaf1Q8BNE1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.79■□□□□ 0.6
Tcaf1Q8BNE1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tcaf1Q8BNE1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tcaf1Q8BNE1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tcaf1Q8BNE1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Tcaf1Q8BNE1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tcaf1Q8BNE1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.78■□□□□ 0.6
Tcaf1Q8BNE1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tcaf1Q8BNE1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tcaf1Q8BNE1 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.78■□□□□ 0.6
Tcaf1Q8BNE1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tcaf1Q8BNE1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Tcaf1Q8BNE1 Gm6433-201ENSMUST00000118634 875 ntBASIC18.78■□□□□ 0.6
Tcaf1Q8BNE1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.78■□□□□ 0.6
Tcaf1Q8BNE1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Tcaf1Q8BNE1 Gm7791-201ENSMUST00000219066 539 ntBASIC18.78■□□□□ 0.6
Tcaf1Q8BNE1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tcaf1Q8BNE1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tcaf1Q8BNE1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.78■□□□□ 0.6
Tcaf1Q8BNE1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.78■□□□□ 0.6
Tcaf1Q8BNE1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tcaf1Q8BNE1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tcaf1Q8BNE1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Tcaf1Q8BNE1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tcaf1Q8BNE1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tcaf1Q8BNE1 Gm9987-201ENSMUST00000069768 567 ntBASIC18.77■□□□□ 0.6
Tcaf1Q8BNE1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tcaf1Q8BNE1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tcaf1Q8BNE1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Tcaf1Q8BNE1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Tcaf1Q8BNE1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Tcaf1Q8BNE1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tcaf1Q8BNE1 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.77■□□□□ 0.59
Tcaf1Q8BNE1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tcaf1Q8BNE1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcaf1Q8BNE1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Tcaf1Q8BNE1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcaf1Q8BNE1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcaf1Q8BNE1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Tcaf1Q8BNE1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Tcaf1Q8BNE1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Tcaf1Q8BNE1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Tcaf1Q8BNE1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcaf1Q8BNE1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Tcaf1Q8BNE1 Gm7889-201ENSMUST00000185591 958 ntBASIC18.76■□□□□ 0.59
Tcaf1Q8BNE1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Tcaf1Q8BNE1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Tcaf1Q8BNE1 Gm9731-201ENSMUST00000209480 747 ntBASIC18.76■□□□□ 0.59
Tcaf1Q8BNE1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tcaf1Q8BNE1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcaf1Q8BNE1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms