Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cdhr3Q8BL00 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr3Q8BL00 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cdhr3Q8BL00 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cdhr3Q8BL00 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr3Q8BL00 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr3Q8BL00 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr3Q8BL00 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr3Q8BL00 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr3Q8BL00 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cdhr3Q8BL00 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr3Q8BL00 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.24■□□□□ 0.03
Cdhr3Q8BL00 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr3Q8BL00 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cdhr3Q8BL00 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr3Q8BL00 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cdhr3Q8BL00 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr3Q8BL00 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr3Q8BL00 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr3Q8BL00 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr3Q8BL00 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr3Q8BL00 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr3Q8BL00 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.23■□□□□ 0.03
Cdhr3Q8BL00 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr3Q8BL00 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cdhr3Q8BL00 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Cdhr3Q8BL00 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr3Q8BL00 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.23■□□□□ 0.03
Cdhr3Q8BL00 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr3Q8BL00 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr3Q8BL00 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.22■□□□□ 0.03
Cdhr3Q8BL00 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cdhr3Q8BL00 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdhr3Q8BL00 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdhr3Q8BL00 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cdhr3Q8BL00 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdhr3Q8BL00 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdhr3Q8BL00 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdhr3Q8BL00 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdhr3Q8BL00 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdhr3Q8BL00 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdhr3Q8BL00 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdhr3Q8BL00 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdhr3Q8BL00 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdhr3Q8BL00 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdhr3Q8BL00 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.21■□□□□ 0.03
Cdhr3Q8BL00 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdhr3Q8BL00 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdhr3Q8BL00 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cdhr3Q8BL00 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdhr3Q8BL00 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdhr3Q8BL00 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cdhr3Q8BL00 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdhr3Q8BL00 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cdhr3Q8BL00 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdhr3Q8BL00 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.21■□□□□ 0.03
Cdhr3Q8BL00 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdhr3Q8BL00 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdhr3Q8BL00 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdhr3Q8BL00 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Cdhr3Q8BL00 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdhr3Q8BL00 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdhr3Q8BL00 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.21■□□□□ 0.02
Cdhr3Q8BL00 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cdhr3Q8BL00 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Cdhr3Q8BL00 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdhr3Q8BL00 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdhr3Q8BL00 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdhr3Q8BL00 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdhr3Q8BL00 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.2■□□□□ 0.02
Cdhr3Q8BL00 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.2■□□□□ 0.02
Cdhr3Q8BL00 Gm10849-201ENSMUST00000100397 618 ntBASIC15.2■□□□□ 0.02
Cdhr3Q8BL00 Mir2861-201ENSMUST00000175539 82 ntBASIC15.2■□□□□ 0.02
Cdhr3Q8BL00 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdhr3Q8BL00 Gm26571-201ENSMUST00000181399 666 ntBASIC15.2■□□□□ 0.02
Cdhr3Q8BL00 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdhr3Q8BL00 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdhr3Q8BL00 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdhr3Q8BL00 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdhr3Q8BL00 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdhr3Q8BL00 Flg-201ENSMUST00000050758 1488 ntBASIC15.2■□□□□ 0.02
Cdhr3Q8BL00 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cdhr3Q8BL00 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.2■□□□□ 0.02
Cdhr3Q8BL00 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdhr3Q8BL00 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdhr3Q8BL00 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdhr3Q8BL00 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Cdhr3Q8BL00 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdhr3Q8BL00 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdhr3Q8BL00 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdhr3Q8BL00 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdhr3Q8BL00 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Cdhr3Q8BL00 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cdhr3Q8BL00 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.19■□□□□ 0.02
Cdhr3Q8BL00 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.19■□□□□ 0.02
Cdhr3Q8BL00 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdhr3Q8BL00 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdhr3Q8BL00 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdhr3Q8BL00 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdhr3Q8BL00 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms