Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Rnf38Q8BI21 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf38Q8BI21 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Rnf38Q8BI21 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf38Q8BI21 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.81■□□□□ 0.28
Rnf38Q8BI21 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf38Q8BI21 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf38Q8BI21 Mtag2-201ENSMUST00000058665 714 ntBASIC16.81■□□□□ 0.28
Rnf38Q8BI21 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.81■□□□□ 0.28
Rnf38Q8BI21 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.81■□□□□ 0.28
Rnf38Q8BI21 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf38Q8BI21 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf38Q8BI21 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Rnf38Q8BI21 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf38Q8BI21 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rnf38Q8BI21 Haglr-201ENSMUST00000100000 2085 ntBASIC16.81■□□□□ 0.28
Rnf38Q8BI21 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf38Q8BI21 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf38Q8BI21 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf38Q8BI21 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.8■□□□□ 0.28
Rnf38Q8BI21 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf38Q8BI21 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf38Q8BI21 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf38Q8BI21 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf38Q8BI21 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf38Q8BI21 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf38Q8BI21 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Rnf38Q8BI21 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rnf38Q8BI21 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf38Q8BI21 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf38Q8BI21 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.8■□□□□ 0.28
Rnf38Q8BI21 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf38Q8BI21 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf38Q8BI21 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf38Q8BI21 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf38Q8BI21 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf38Q8BI21 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rnf38Q8BI21 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf38Q8BI21 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Rnf38Q8BI21 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.79■□□□□ 0.28
Rnf38Q8BI21 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf38Q8BI21 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf38Q8BI21 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf38Q8BI21 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf38Q8BI21 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf38Q8BI21 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf38Q8BI21 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf38Q8BI21 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rnf38Q8BI21 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf38Q8BI21 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf38Q8BI21 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf38Q8BI21 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf38Q8BI21 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rnf38Q8BI21 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.78■□□□□ 0.28
Rnf38Q8BI21 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf38Q8BI21 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf38Q8BI21 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf38Q8BI21 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf38Q8BI21 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rnf38Q8BI21 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rnf38Q8BI21 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf38Q8BI21 Mir2861-201ENSMUST00000175539 82 ntBASIC16.78■□□□□ 0.28
Rnf38Q8BI21 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rnf38Q8BI21 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rnf38Q8BI21 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rnf38Q8BI21 Gm10602-201ENSMUST00000098239 609 ntBASIC16.78■□□□□ 0.28
Rnf38Q8BI21 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf38Q8BI21 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf38Q8BI21 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf38Q8BI21 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.78■□□□□ 0.28
Rnf38Q8BI21 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf38Q8BI21 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf38Q8BI21 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf38Q8BI21 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf38Q8BI21 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf38Q8BI21 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf38Q8BI21 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf38Q8BI21 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf38Q8BI21 Gm13401-201ENSMUST00000117074 291 ntBASIC16.77■□□□□ 0.28
Rnf38Q8BI21 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf38Q8BI21 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.77■□□□□ 0.28
Rnf38Q8BI21 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Rnf38Q8BI21 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf38Q8BI21 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf38Q8BI21 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf38Q8BI21 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf38Q8BI21 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf38Q8BI21 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf38Q8BI21 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf38Q8BI21 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf38Q8BI21 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.76■□□□□ 0.27
Rnf38Q8BI21 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf38Q8BI21 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf38Q8BI21 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf38Q8BI21 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Rnf38Q8BI21 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf38Q8BI21 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf38Q8BI21 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Rnf38Q8BI21 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.76■□□□□ 0.27
Rnf38Q8BI21 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms