Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc5a7Q8BGY9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Slc5a7Q8BGY9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc5a7Q8BGY9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Slc5a7Q8BGY9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Slc5a7Q8BGY9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Slc5a7Q8BGY9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc5a7Q8BGY9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Slc5a7Q8BGY9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc5a7Q8BGY9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc5a7Q8BGY9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc5a7Q8BGY9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc5a7Q8BGY9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Slc5a7Q8BGY9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Slc5a7Q8BGY9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc5a7Q8BGY9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.3■□□□□ 0.04
Slc5a7Q8BGY9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc5a7Q8BGY9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc5a7Q8BGY9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc5a7Q8BGY9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Slc5a7Q8BGY9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Slc5a7Q8BGY9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc5a7Q8BGY9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc5a7Q8BGY9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc5a7Q8BGY9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc5a7Q8BGY9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Gm8493-201ENSMUST00000196881 489 ntBASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc5a7Q8BGY9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Slc5a7Q8BGY9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc5a7Q8BGY9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Slc5a7Q8BGY9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Slc5a7Q8BGY9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slc5a7Q8BGY9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc5a7Q8BGY9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc5a7Q8BGY9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Slc5a7Q8BGY9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.28■□□□□ 0.04
Slc5a7Q8BGY9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc5a7Q8BGY9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slc5a7Q8BGY9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slc5a7Q8BGY9 Gm40848-201ENSMUST00000221998 324 ntBASIC15.28■□□□□ 0.04
Slc5a7Q8BGY9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc5a7Q8BGY9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc5a7Q8BGY9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc5a7Q8BGY9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slc5a7Q8BGY9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc5a7Q8BGY9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc5a7Q8BGY9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc5a7Q8BGY9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc5a7Q8BGY9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Slc5a7Q8BGY9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc5a7Q8BGY9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc5a7Q8BGY9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc5a7Q8BGY9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc5a7Q8BGY9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.27■□□□□ 0.04
Slc5a7Q8BGY9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Slc5a7Q8BGY9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc5a7Q8BGY9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc5a7Q8BGY9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc5a7Q8BGY9 Gm13146-201ENSMUST00000118508 780 ntBASIC15.27■□□□□ 0.04
Slc5a7Q8BGY9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.27■□□□□ 0.04
Slc5a7Q8BGY9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Slc5a7Q8BGY9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc5a7Q8BGY9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc5a7Q8BGY9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc5a7Q8BGY9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc5a7Q8BGY9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc5a7Q8BGY9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc5a7Q8BGY9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.27■□□□□ 0.03
Slc5a7Q8BGY9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc5a7Q8BGY9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc5a7Q8BGY9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Slc5a7Q8BGY9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc5a7Q8BGY9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms