Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.22■□□□□ 0.67
Usp6nlQ80XC3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp6nlQ80XC3 Gm26039-201ENSMUST00000158152 144 ntBASIC19.22■□□□□ 0.67
Usp6nlQ80XC3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp6nlQ80XC3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Usp6nlQ80XC3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp6nlQ80XC3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp6nlQ80XC3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp6nlQ80XC3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.22■□□□□ 0.67
Usp6nlQ80XC3 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp6nlQ80XC3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp6nlQ80XC3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp6nlQ80XC3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp6nlQ80XC3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.21■□□□□ 0.67
Usp6nlQ80XC3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp6nlQ80XC3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp6nlQ80XC3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp6nlQ80XC3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp6nlQ80XC3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp6nlQ80XC3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Usp6nlQ80XC3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp6nlQ80XC3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.21■□□□□ 0.67
Usp6nlQ80XC3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp6nlQ80XC3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Usp6nlQ80XC3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp6nlQ80XC3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Usp6nlQ80XC3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Usp6nlQ80XC3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Usp6nlQ80XC3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.21■□□□□ 0.67
Usp6nlQ80XC3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp6nlQ80XC3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Usp6nlQ80XC3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Usp6nlQ80XC3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Usp6nlQ80XC3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Usp6nlQ80XC3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.2■□□□□ 0.66
Usp6nlQ80XC3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.2■□□□□ 0.66
Usp6nlQ80XC3 Gm18958-201ENSMUST00000174258 762 ntBASIC19.2■□□□□ 0.66
Usp6nlQ80XC3 Gm18669-201ENSMUST00000216049 778 ntBASIC19.2■□□□□ 0.66
Usp6nlQ80XC3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp6nlQ80XC3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp6nlQ80XC3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp6nlQ80XC3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp6nlQ80XC3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp6nlQ80XC3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp6nlQ80XC3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp6nlQ80XC3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp6nlQ80XC3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.19■□□□□ 0.66
Usp6nlQ80XC3 Gm11950-201ENSMUST00000121615 838 ntBASIC19.19■□□□□ 0.66
Usp6nlQ80XC3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp6nlQ80XC3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp6nlQ80XC3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.19■□□□□ 0.66
Usp6nlQ80XC3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.19■□□□□ 0.66
Usp6nlQ80XC3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp6nlQ80XC3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp6nlQ80XC3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp6nlQ80XC3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp6nlQ80XC3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp6nlQ80XC3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Usp6nlQ80XC3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Usp6nlQ80XC3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp6nlQ80XC3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Usp6nlQ80XC3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Usp6nlQ80XC3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp6nlQ80XC3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp6nlQ80XC3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp6nlQ80XC3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Usp6nlQ80XC3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp6nlQ80XC3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp6nlQ80XC3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Usp6nlQ80XC3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp6nlQ80XC3 Actl10-202ENSMUST00000226583 1501 ntBASIC19.18■□□□□ 0.66
Usp6nlQ80XC3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp6nlQ80XC3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.18■□□□□ 0.66
Usp6nlQ80XC3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Usp6nlQ80XC3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp6nlQ80XC3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Usp6nlQ80XC3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp6nlQ80XC3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.17■□□□□ 0.66
Usp6nlQ80XC3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp6nlQ80XC3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp6nlQ80XC3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp6nlQ80XC3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Usp6nlQ80XC3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp6nlQ80XC3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.17■□□□□ 0.66
Usp6nlQ80XC3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp6nlQ80XC3 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.17■□□□□ 0.66
Usp6nlQ80XC3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp6nlQ80XC3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp6nlQ80XC3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Usp6nlQ80XC3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp6nlQ80XC3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.16■□□□□ 0.66
Usp6nlQ80XC3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp6nlQ80XC3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp6nlQ80XC3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp6nlQ80XC3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp6nlQ80XC3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp6nlQ80XC3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.16■□□□□ 0.66
Usp6nlQ80XC3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Usp6nlQ80XC3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.16■□□□□ 0.66
Usp6nlQ80XC3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 103.5 ms