Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc116Q80X53 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc116Q80X53 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc116Q80X53 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc116Q80X53 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc116Q80X53 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc116Q80X53 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc116Q80X53 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Ccdc116Q80X53 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc116Q80X53 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc116Q80X53 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc116Q80X53 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc116Q80X53 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc116Q80X53 Gm13158-201ENSMUST00000122007 736 ntBASIC17.06■□□□□ 0.32
Ccdc116Q80X53 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc116Q80X53 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.06■□□□□ 0.32
Ccdc116Q80X53 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc116Q80X53 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc116Q80X53 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc116Q80X53 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc116Q80X53 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc116Q80X53 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc116Q80X53 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc116Q80X53 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ccdc116Q80X53 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc116Q80X53 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc116Q80X53 Gm6576-201ENSMUST00000169678 883 ntBASIC17.05■□□□□ 0.32
Ccdc116Q80X53 Gm37856-201ENSMUST00000191634 999 ntBASIC17.05■□□□□ 0.32
Ccdc116Q80X53 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc116Q80X53 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc116Q80X53 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc116Q80X53 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc116Q80X53 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc116Q80X53 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc116Q80X53 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.04■□□□□ 0.32
Ccdc116Q80X53 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.04■□□□□ 0.32
Ccdc116Q80X53 Gm42545-201ENSMUST00000202755 922 ntBASIC17.04■□□□□ 0.32
Ccdc116Q80X53 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.04■□□□□ 0.32
Ccdc116Q80X53 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.04■□□□□ 0.32
Ccdc116Q80X53 Gm18025-201ENSMUST00000221733 862 ntBASIC17.04■□□□□ 0.32
Ccdc116Q80X53 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc116Q80X53 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc116Q80X53 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc116Q80X53 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc116Q80X53 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc116Q80X53 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc116Q80X53 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc116Q80X53 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc116Q80X53 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc116Q80X53 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc116Q80X53 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc116Q80X53 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc116Q80X53 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Ccdc116Q80X53 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc116Q80X53 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc116Q80X53 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc116Q80X53 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc116Q80X53 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc116Q80X53 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.03■□□□□ 0.32
Ccdc116Q80X53 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc116Q80X53 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc116Q80X53 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc116Q80X53 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ccdc116Q80X53 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc116Q80X53 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc116Q80X53 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc116Q80X53 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc116Q80X53 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.02■□□□□ 0.32
Ccdc116Q80X53 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Ccdc116Q80X53 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc116Q80X53 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.02■□□□□ 0.32
Ccdc116Q80X53 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc116Q80X53 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc116Q80X53 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc116Q80X53 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.02■□□□□ 0.32
Ccdc116Q80X53 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc116Q80X53 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.02■□□□□ 0.32
Ccdc116Q80X53 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.02■□□□□ 0.32
Ccdc116Q80X53 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc116Q80X53 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.02■□□□□ 0.32
Ccdc116Q80X53 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc116Q80X53 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc116Q80X53 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Ccdc116Q80X53 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc116Q80X53 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc116Q80X53 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
Ccdc116Q80X53 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc116Q80X53 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc116Q80X53 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc116Q80X53 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Ccdc116Q80X53 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc116Q80X53 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc116Q80X53 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc116Q80X53 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc116Q80X53 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Ccdc116Q80X53 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.01■□□□□ 0.31
Ccdc116Q80X53 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.01■□□□□ 0.31
Ccdc116Q80X53 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc116Q80X53 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc116Q80X53 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms