Protein–RNA interactions for Protein: Q80WR1

Tspan18, Tetraspanin-18, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan18Q80WR1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Tspan18Q80WR1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tspan18Q80WR1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tspan18Q80WR1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tspan18Q80WR1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tspan18Q80WR1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tspan18Q80WR1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tspan18Q80WR1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tspan18Q80WR1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tspan18Q80WR1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.52■□□□□ 0.56
Tspan18Q80WR1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.52■□□□□ 0.56
Tspan18Q80WR1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.52■□□□□ 0.56
Tspan18Q80WR1 Gm7977-201ENSMUST00000193787 748 ntBASIC18.52■□□□□ 0.56
Tspan18Q80WR1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tspan18Q80WR1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tspan18Q80WR1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tspan18Q80WR1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tspan18Q80WR1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tspan18Q80WR1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tspan18Q80WR1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Tspan18Q80WR1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Tspan18Q80WR1 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.51■□□□□ 0.55
Tspan18Q80WR1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Tspan18Q80WR1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tspan18Q80WR1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Tspan18Q80WR1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.51■□□□□ 0.55
Tspan18Q80WR1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tspan18Q80WR1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.51■□□□□ 0.55
Tspan18Q80WR1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tspan18Q80WR1 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.51■□□□□ 0.55
Tspan18Q80WR1 Gm18032-201ENSMUST00000222541 538 ntBASIC18.51■□□□□ 0.55
Tspan18Q80WR1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tspan18Q80WR1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Tspan18Q80WR1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tspan18Q80WR1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tspan18Q80WR1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tspan18Q80WR1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tspan18Q80WR1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Tspan18Q80WR1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tspan18Q80WR1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tspan18Q80WR1 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Tspan18Q80WR1 Haglr-201ENSMUST00000100000 2085 ntBASIC18.5■□□□□ 0.55
Tspan18Q80WR1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Tspan18Q80WR1 Gm7370-201ENSMUST00000219471 767 ntBASIC18.5■□□□□ 0.55
Tspan18Q80WR1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tspan18Q80WR1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tspan18Q80WR1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tspan18Q80WR1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Tspan18Q80WR1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tspan18Q80WR1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tspan18Q80WR1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tspan18Q80WR1 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.49■□□□□ 0.55
Tspan18Q80WR1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tspan18Q80WR1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.49■□□□□ 0.55
Tspan18Q80WR1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tspan18Q80WR1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Tspan18Q80WR1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tspan18Q80WR1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.49■□□□□ 0.55
Tspan18Q80WR1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.49■□□□□ 0.55
Tspan18Q80WR1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tspan18Q80WR1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tspan18Q80WR1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tspan18Q80WR1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tspan18Q80WR1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Tspan18Q80WR1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.48■□□□□ 0.55
Tspan18Q80WR1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.48■□□□□ 0.55
Tspan18Q80WR1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Tspan18Q80WR1 Mir1668-201ENSMUST00000184114 107 ntBASIC18.48■□□□□ 0.55
Tspan18Q80WR1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tspan18Q80WR1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Tspan18Q80WR1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tspan18Q80WR1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tspan18Q80WR1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tspan18Q80WR1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tspan18Q80WR1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tspan18Q80WR1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Tspan18Q80WR1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tspan18Q80WR1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Tspan18Q80WR1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tspan18Q80WR1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Tspan18Q80WR1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Tspan18Q80WR1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tspan18Q80WR1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tspan18Q80WR1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.47■□□□□ 0.55
Tspan18Q80WR1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Tspan18Q80WR1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.47■□□□□ 0.55
Tspan18Q80WR1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tspan18Q80WR1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tspan18Q80WR1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tspan18Q80WR1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tspan18Q80WR1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tspan18Q80WR1 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.47■□□□□ 0.55
Tspan18Q80WR1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.47■□□□□ 0.55
Tspan18Q80WR1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tspan18Q80WR1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Tspan18Q80WR1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tspan18Q80WR1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tspan18Q80WR1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tspan18Q80WR1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tspan18Q80WR1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms