Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Prpf40bQ80W14 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Prpf40bQ80W14 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Prpf40bQ80W14 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Prpf40bQ80W14 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf40bQ80W14 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.07■□□□□ 0.8
Prpf40bQ80W14 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC20.07■□□□□ 0.8
Prpf40bQ80W14 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.07■□□□□ 0.8
Prpf40bQ80W14 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.07■□□□□ 0.8
Prpf40bQ80W14 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf40bQ80W14 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf40bQ80W14 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Prpf40bQ80W14 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf40bQ80W14 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf40bQ80W14 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf40bQ80W14 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.07■□□□□ 0.8
Prpf40bQ80W14 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf40bQ80W14 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf40bQ80W14 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf40bQ80W14 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Prpf40bQ80W14 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Prpf40bQ80W14 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Prpf40bQ80W14 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.06■□□□□ 0.8
Prpf40bQ80W14 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Prpf40bQ80W14 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Prpf40bQ80W14 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf40bQ80W14 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf40bQ80W14 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf40bQ80W14 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf40bQ80W14 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf40bQ80W14 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf40bQ80W14 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Prpf40bQ80W14 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf40bQ80W14 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf40bQ80W14 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf40bQ80W14 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf40bQ80W14 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Prpf40bQ80W14 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Prpf40bQ80W14 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.05■□□□□ 0.8
Prpf40bQ80W14 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Prpf40bQ80W14 Gm28033-201ENSMUST00000184224 96 ntBASIC20.05■□□□□ 0.8
Prpf40bQ80W14 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf40bQ80W14 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Prpf40bQ80W14 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Prpf40bQ80W14 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
Prpf40bQ80W14 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Prpf40bQ80W14 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Prpf40bQ80W14 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf40bQ80W14 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.04■□□□□ 0.8
Prpf40bQ80W14 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.04■□□□□ 0.8
Prpf40bQ80W14 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Prpf40bQ80W14 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf40bQ80W14 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf40bQ80W14 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Prpf40bQ80W14 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf40bQ80W14 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf40bQ80W14 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.04■□□□□ 0.8
Prpf40bQ80W14 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf40bQ80W14 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40bQ80W14 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Prpf40bQ80W14 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40bQ80W14 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40bQ80W14 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.03■□□□□ 0.8
Prpf40bQ80W14 Gm25925-201ENSMUST00000158314 306 ntBASIC20.03■□□□□ 0.8
Prpf40bQ80W14 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40bQ80W14 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.03■□□□□ 0.8
Prpf40bQ80W14 Gm27704-201ENSMUST00000185094 107 ntBASIC20.03■□□□□ 0.8
Prpf40bQ80W14 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.03■□□□□ 0.8
Prpf40bQ80W14 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.03■□□□□ 0.8
Prpf40bQ80W14 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40bQ80W14 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40bQ80W14 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40bQ80W14 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40bQ80W14 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40bQ80W14 Fst-202ENSMUST00000223640 2612 ntBASIC20.03■□□□□ 0.8
Prpf40bQ80W14 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40bQ80W14 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Prpf40bQ80W14 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.02■□□□□ 0.8
Prpf40bQ80W14 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf40bQ80W14 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf40bQ80W14 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf40bQ80W14 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Prpf40bQ80W14 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.02■□□□□ 0.8
Prpf40bQ80W14 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.02■□□□□ 0.8
Prpf40bQ80W14 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Prpf40bQ80W14 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Prpf40bQ80W14 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf40bQ80W14 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf40bQ80W14 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf40bQ80W14 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf40bQ80W14 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf40bQ80W14 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf40bQ80W14 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf40bQ80W14 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Prpf40bQ80W14 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Prpf40bQ80W14 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Prpf40bQ80W14 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Prpf40bQ80W14 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Prpf40bQ80W14 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf40bQ80W14 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms