Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Otop1Q80VM9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Otop1Q80VM9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Otop1Q80VM9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Otop1Q80VM9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Otop1Q80VM9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Otop1Q80VM9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Otop1Q80VM9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Otop1Q80VM9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Otop1Q80VM9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Otop1Q80VM9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Otop1Q80VM9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.71■□□□□ 0.27
Otop1Q80VM9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.71■□□□□ 0.27
Otop1Q80VM9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Otop1Q80VM9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Otop1Q80VM9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Otop1Q80VM9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Otop1Q80VM9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Otop1Q80VM9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Otop1Q80VM9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Otop1Q80VM9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Otop1Q80VM9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Otop1Q80VM9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Otop1Q80VM9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Otop1Q80VM9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Otop1Q80VM9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Otop1Q80VM9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Otop1Q80VM9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Otop1Q80VM9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Otop1Q80VM9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Otop1Q80VM9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Otop1Q80VM9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Otop1Q80VM9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Otop1Q80VM9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.7■□□□□ 0.26
Otop1Q80VM9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Otop1Q80VM9 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.7■□□□□ 0.26
Otop1Q80VM9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Otop1Q80VM9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Otop1Q80VM9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Otop1Q80VM9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Otop1Q80VM9 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.7■□□□□ 0.26
Otop1Q80VM9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Otop1Q80VM9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Otop1Q80VM9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Otop1Q80VM9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Otop1Q80VM9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Otop1Q80VM9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Otop1Q80VM9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
Otop1Q80VM9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Otop1Q80VM9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Otop1Q80VM9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Otop1Q80VM9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Otop1Q80VM9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.69■□□□□ 0.26
Otop1Q80VM9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Otop1Q80VM9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Otop1Q80VM9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Otop1Q80VM9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Otop1Q80VM9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.69■□□□□ 0.26
Otop1Q80VM9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.69■□□□□ 0.26
Otop1Q80VM9 Gm7638-201ENSMUST00000121348 967 ntBASIC16.69■□□□□ 0.26
Otop1Q80VM9 Gm9013-201ENSMUST00000132939 882 ntBASIC16.69■□□□□ 0.26
Otop1Q80VM9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Otop1Q80VM9 Gm29518-201ENSMUST00000190858 372 ntBASIC16.69■□□□□ 0.26
Otop1Q80VM9 Gm7791-201ENSMUST00000219066 539 ntBASIC16.69■□□□□ 0.26
Otop1Q80VM9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Otop1Q80VM9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Otop1Q80VM9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Otop1Q80VM9 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.69■□□□□ 0.26
Otop1Q80VM9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Otop1Q80VM9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Otop1Q80VM9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Otop1Q80VM9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Otop1Q80VM9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Otop1Q80VM9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Otop1Q80VM9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Otop1Q80VM9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Otop1Q80VM9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.68■□□□□ 0.26
Otop1Q80VM9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Otop1Q80VM9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Otop1Q80VM9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Otop1Q80VM9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Otop1Q80VM9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Otop1Q80VM9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.68■□□□□ 0.26
Otop1Q80VM9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Otop1Q80VM9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Otop1Q80VM9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Otop1Q80VM9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.68■□□□□ 0.26
Otop1Q80VM9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Otop1Q80VM9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Otop1Q80VM9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Otop1Q80VM9 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.68■□□□□ 0.26
Otop1Q80VM9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Otop1Q80VM9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.68■□□□□ 0.26
Otop1Q80VM9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
Otop1Q80VM9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Otop1Q80VM9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Otop1Q80VM9 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.67■□□□□ 0.26
Otop1Q80VM9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Otop1Q80VM9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Otop1Q80VM9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms