Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.39■□□□□ 0.37
Rpp38Q80UU2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.39■□□□□ 0.37
Rpp38Q80UU2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpp38Q80UU2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rpp38Q80UU2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpp38Q80UU2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpp38Q80UU2 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.38■□□□□ 0.37
Rpp38Q80UU2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpp38Q80UU2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rpp38Q80UU2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rpp38Q80UU2 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.38■□□□□ 0.37
Rpp38Q80UU2 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.38■□□□□ 0.37
Rpp38Q80UU2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rpp38Q80UU2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpp38Q80UU2 Gm10812-201ENSMUST00000099864 546 ntBASIC17.38■□□□□ 0.37
Rpp38Q80UU2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpp38Q80UU2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.38■□□□□ 0.37
Rpp38Q80UU2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rpp38Q80UU2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp38Q80UU2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp38Q80UU2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rpp38Q80UU2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp38Q80UU2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp38Q80UU2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp38Q80UU2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp38Q80UU2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp38Q80UU2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.37■□□□□ 0.37
Rpp38Q80UU2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.37■□□□□ 0.37
Rpp38Q80UU2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp38Q80UU2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp38Q80UU2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp38Q80UU2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp38Q80UU2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Rpp38Q80UU2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.37■□□□□ 0.37
Rpp38Q80UU2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpp38Q80UU2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rpp38Q80UU2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp38Q80UU2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp38Q80UU2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.36■□□□□ 0.37
Rpp38Q80UU2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Rpp38Q80UU2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp38Q80UU2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.36■□□□□ 0.37
Rpp38Q80UU2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp38Q80UU2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Rpp38Q80UU2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp38Q80UU2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.36■□□□□ 0.37
Rpp38Q80UU2 Gm715-201ENSMUST00000117865 831 ntBASIC17.36■□□□□ 0.37
Rpp38Q80UU2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.36■□□□□ 0.37
Rpp38Q80UU2 Gm37025-201ENSMUST00000195159 829 ntBASIC17.36■□□□□ 0.37
Rpp38Q80UU2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp38Q80UU2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rpp38Q80UU2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp38Q80UU2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rpp38Q80UU2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp38Q80UU2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp38Q80UU2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp38Q80UU2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp38Q80UU2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpp38Q80UU2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp38Q80UU2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp38Q80UU2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.35■□□□□ 0.37
Rpp38Q80UU2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Rpp38Q80UU2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp38Q80UU2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp38Q80UU2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp38Q80UU2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Rpp38Q80UU2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.35■□□□□ 0.37
Rpp38Q80UU2 Gm17661-201ENSMUST00000170317 270 ntBASIC17.35■□□□□ 0.37
Rpp38Q80UU2 Gm38027-201ENSMUST00000192315 235 ntBASIC17.35■□□□□ 0.37
Rpp38Q80UU2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.35■□□□□ 0.37
Rpp38Q80UU2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp38Q80UU2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp38Q80UU2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp38Q80UU2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp38Q80UU2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp38Q80UU2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp38Q80UU2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp38Q80UU2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp38Q80UU2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp38Q80UU2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpp38Q80UU2 Gm12085-201ENSMUST00000119263 940 ntBASIC17.34■□□□□ 0.37
Rpp38Q80UU2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpp38Q80UU2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.34■□□□□ 0.37
Rpp38Q80UU2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpp38Q80UU2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rpp38Q80UU2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpp38Q80UU2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpp38Q80UU2 Timm23-208ENSMUST00000226683 750 ntBASIC17.34■□□□□ 0.37
Rpp38Q80UU2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rpp38Q80UU2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rpp38Q80UU2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpp38Q80UU2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpp38Q80UU2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpp38Q80UU2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rpp38Q80UU2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpp38Q80UU2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpp38Q80UU2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpp38Q80UU2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpp38Q80UU2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpp38Q80UU2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms