Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp8Q80U87 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp8Q80U87 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.47■□□□□ 0.39
Usp8Q80U87 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp8Q80U87 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp8Q80U87 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp8Q80U87 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.47■□□□□ 0.39
Usp8Q80U87 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp8Q80U87 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Usp8Q80U87 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp8Q80U87 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp8Q80U87 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp8Q80U87 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Usp8Q80U87 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.46■□□□□ 0.39
Usp8Q80U87 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp8Q80U87 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp8Q80U87 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp8Q80U87 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp8Q80U87 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.46■□□□□ 0.39
Usp8Q80U87 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.46■□□□□ 0.39
Usp8Q80U87 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.46■□□□□ 0.39
Usp8Q80U87 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.46■□□□□ 0.39
Usp8Q80U87 Gm37179-201ENSMUST00000194862 823 ntBASIC17.46■□□□□ 0.39
Usp8Q80U87 Rab3c-203ENSMUST00000224180 967 ntBASIC17.46■□□□□ 0.39
Usp8Q80U87 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp8Q80U87 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp8Q80U87 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Usp8Q80U87 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp8Q80U87 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp8Q80U87 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.46■□□□□ 0.39
Usp8Q80U87 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp8Q80U87 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp8Q80U87 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Usp8Q80U87 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Usp8Q80U87 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp8Q80U87 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.45■□□□□ 0.38
Usp8Q80U87 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp8Q80U87 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp8Q80U87 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Usp8Q80U87 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp8Q80U87 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp8Q80U87 Gm38285-201ENSMUST00000192928 922 ntBASIC17.45■□□□□ 0.38
Usp8Q80U87 Gm8969-201ENSMUST00000199694 526 ntBASIC17.45■□□□□ 0.38
Usp8Q80U87 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.45■□□□□ 0.38
Usp8Q80U87 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.45■□□□□ 0.38
Usp8Q80U87 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.45■□□□□ 0.38
Usp8Q80U87 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp8Q80U87 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp8Q80U87 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp8Q80U87 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp8Q80U87 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp8Q80U87 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp8Q80U87 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Usp8Q80U87 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp8Q80U87 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp8Q80U87 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Usp8Q80U87 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp8Q80U87 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp8Q80U87 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
Usp8Q80U87 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp8Q80U87 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp8Q80U87 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp8Q80U87 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp8Q80U87 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.44■□□□□ 0.38
Usp8Q80U87 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.44■□□□□ 0.38
Usp8Q80U87 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.44■□□□□ 0.38
Usp8Q80U87 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp8Q80U87 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Usp8Q80U87 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.44■□□□□ 0.38
Usp8Q80U87 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp8Q80U87 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.44■□□□□ 0.38
Usp8Q80U87 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp8Q80U87 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Usp8Q80U87 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Usp8Q80U87 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp8Q80U87 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp8Q80U87 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp8Q80U87 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp8Q80U87 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Usp8Q80U87 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp8Q80U87 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Usp8Q80U87 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.43■□□□□ 0.38
Usp8Q80U87 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp8Q80U87 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp8Q80U87 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp8Q80U87 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp8Q80U87 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp8Q80U87 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp8Q80U87 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp8Q80U87 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.43■□□□□ 0.38
Usp8Q80U87 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.43■□□□□ 0.38
Usp8Q80U87 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp8Q80U87 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp8Q80U87 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp8Q80U87 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp8Q80U87 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp8Q80U87 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp8Q80U87 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp8Q80U87 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Usp8Q80U87 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms