Protein–RNA interactions for Protein: Q80TY5

Vps13b, Vacuolar protein sorting-associated protein 13B, mousemouse

Predictions only

Length 3,993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13bQ80TY5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Vps13bQ80TY5 AC131586.3-201ENSMUST00000228355 1367 ntBASIC10.42□□□□□ -0.74
Vps13bQ80TY5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC10.42□□□□□ -0.74
Vps13bQ80TY5 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vps13bQ80TY5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Vps13bQ80TY5 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Vps13bQ80TY5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Vps13bQ80TY5 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vps13bQ80TY5 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vps13bQ80TY5 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC10.42□□□□□ -0.74
Vps13bQ80TY5 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC10.42□□□□□ -0.74
Vps13bQ80TY5 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Vps13bQ80TY5 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vps13bQ80TY5 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vps13bQ80TY5 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vps13bQ80TY5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Vps13bQ80TY5 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vps13bQ80TY5 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Vps13bQ80TY5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Vps13bQ80TY5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vps13bQ80TY5 Gm14822-201ENSMUST00000122247 291 ntBASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Gm5264-201ENSMUST00000190584 848 ntBASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Gm38342-201ENSMUST00000195710 2980 ntBASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Gm8000-201ENSMUST00000188378 592 ntBASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Gm25911-201ENSMUST00000157621 56 ntBASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Cmtm5-203ENSMUST00000227441 610 ntBASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vps13bQ80TY5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Vps13bQ80TY5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vps13bQ80TY5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vps13bQ80TY5 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Vps13bQ80TY5 Golph3-205ENSMUST00000228671 2842 ntBASIC10.4□□□□□ -0.74
Vps13bQ80TY5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vps13bQ80TY5 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vps13bQ80TY5 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Vps13bQ80TY5 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Vps13bQ80TY5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Vps13bQ80TY5 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC10.4□□□□□ -0.74
Vps13bQ80TY5 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC10.4□□□□□ -0.74
Vps13bQ80TY5 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vps13bQ80TY5 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Vps13bQ80TY5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC10.4□□□□□ -0.74
Vps13bQ80TY5 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vps13bQ80TY5 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vps13bQ80TY5 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vps13bQ80TY5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Vps13bQ80TY5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Vps13bQ80TY5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Vps13bQ80TY5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Vps13bQ80TY5 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.75
Vps13bQ80TY5 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Vps13bQ80TY5 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Vps13bQ80TY5 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vps13bQ80TY5 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Vps13bQ80TY5 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Vps13bQ80TY5 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vps13bQ80TY5 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC10.39□□□□□ -0.75
Vps13bQ80TY5 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Vps13bQ80TY5 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Vps13bQ80TY5 Psmb5-202ENSMUST00000227257 622 ntBASIC10.39□□□□□ -0.75
Vps13bQ80TY5 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vps13bQ80TY5 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vps13bQ80TY5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vps13bQ80TY5 Gm7862-201ENSMUST00000121461 292 ntBASIC10.39□□□□□ -0.75
Vps13bQ80TY5 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.39□□□□□ -0.75
Vps13bQ80TY5 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Vps13bQ80TY5 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Vps13bQ80TY5 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vps13bQ80TY5 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vps13bQ80TY5 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Vps13bQ80TY5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vps13bQ80TY5 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC10.39□□□□□ -0.75
Vps13bQ80TY5 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms