Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh19Q80TF3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh19Q80TF3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh19Q80TF3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh19Q80TF3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh19Q80TF3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh19Q80TF3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh19Q80TF3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdh19Q80TF3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdh19Q80TF3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh19Q80TF3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh19Q80TF3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh19Q80TF3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh19Q80TF3 Gm18959-201ENSMUST00000208954 655 ntBASIC17.12■□□□□ 0.33
Pcdh19Q80TF3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh19Q80TF3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh19Q80TF3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Pcdh19Q80TF3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdh19Q80TF3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh19Q80TF3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh19Q80TF3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh19Q80TF3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh19Q80TF3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh19Q80TF3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh19Q80TF3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdh19Q80TF3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdh19Q80TF3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh19Q80TF3 Fst-202ENSMUST00000223640 2612 ntBASIC17.11■□□□□ 0.33
Pcdh19Q80TF3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh19Q80TF3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdh19Q80TF3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh19Q80TF3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcdh19Q80TF3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh19Q80TF3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh19Q80TF3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh19Q80TF3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh19Q80TF3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh19Q80TF3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh19Q80TF3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh19Q80TF3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
Pcdh19Q80TF3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh19Q80TF3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh19Q80TF3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh19Q80TF3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh19Q80TF3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh19Q80TF3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh19Q80TF3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdh19Q80TF3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.1■□□□□ 0.33
Pcdh19Q80TF3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdh19Q80TF3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh19Q80TF3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh19Q80TF3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh19Q80TF3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh19Q80TF3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh19Q80TF3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdh19Q80TF3 Gm2274-201ENSMUST00000184539 609 ntBASIC17.1■□□□□ 0.33
Pcdh19Q80TF3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Pcdh19Q80TF3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh19Q80TF3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh19Q80TF3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdh19Q80TF3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pcdh19Q80TF3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh19Q80TF3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh19Q80TF3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdh19Q80TF3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh19Q80TF3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdh19Q80TF3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh19Q80TF3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh19Q80TF3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdh19Q80TF3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh19Q80TF3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh19Q80TF3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh19Q80TF3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh19Q80TF3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh19Q80TF3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.09■□□□□ 0.33
Pcdh19Q80TF3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh19Q80TF3 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.09■□□□□ 0.33
Pcdh19Q80TF3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh19Q80TF3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pcdh19Q80TF3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh19Q80TF3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh19Q80TF3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh19Q80TF3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh19Q80TF3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.09■□□□□ 0.33
Pcdh19Q80TF3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh19Q80TF3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh19Q80TF3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdh19Q80TF3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh19Q80TF3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh19Q80TF3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdh19Q80TF3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.08■□□□□ 0.33
Pcdh19Q80TF3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pcdh19Q80TF3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh19Q80TF3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh19Q80TF3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.08■□□□□ 0.32
Pcdh19Q80TF3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.08■□□□□ 0.32
Pcdh19Q80TF3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms