Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ush1gQ80T11 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ush1gQ80T11 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ush1gQ80T11 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ush1gQ80T11 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ush1gQ80T11 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ush1gQ80T11 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ush1gQ80T11 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ush1gQ80T11 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ush1gQ80T11 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ush1gQ80T11 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ush1gQ80T11 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ush1gQ80T11 Grk6-206ENSMUST00000224995 2971 ntBASIC19.05■□□□□ 0.64
Ush1gQ80T11 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ush1gQ80T11 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Ush1gQ80T11 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ush1gQ80T11 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ush1gQ80T11 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Ush1gQ80T11 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ush1gQ80T11 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ush1gQ80T11 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ush1gQ80T11 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ush1gQ80T11 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ush1gQ80T11 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ush1gQ80T11 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ush1gQ80T11 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ush1gQ80T11 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ush1gQ80T11 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.05■□□□□ 0.64
Ush1gQ80T11 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ush1gQ80T11 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ush1gQ80T11 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ush1gQ80T11 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ush1gQ80T11 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ush1gQ80T11 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ush1gQ80T11 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ush1gQ80T11 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ush1gQ80T11 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ush1gQ80T11 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ush1gQ80T11 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ush1gQ80T11 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ush1gQ80T11 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.04■□□□□ 0.64
Ush1gQ80T11 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ush1gQ80T11 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ush1gQ80T11 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ush1gQ80T11 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.03■□□□□ 0.64
Ush1gQ80T11 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ush1gQ80T11 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ush1gQ80T11 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ush1gQ80T11 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ush1gQ80T11 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ush1gQ80T11 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.03■□□□□ 0.64
Ush1gQ80T11 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ush1gQ80T11 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Ush1gQ80T11 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ush1gQ80T11 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ush1gQ80T11 Gm29791-202ENSMUST00000207888 369 ntBASIC19.03■□□□□ 0.64
Ush1gQ80T11 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ush1gQ80T11 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Ush1gQ80T11 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.03■□□□□ 0.64
Ush1gQ80T11 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.03■□□□□ 0.64
Ush1gQ80T11 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Ush1gQ80T11 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ush1gQ80T11 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ush1gQ80T11 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ush1gQ80T11 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ush1gQ80T11 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Ush1gQ80T11 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Ush1gQ80T11 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Ush1gQ80T11 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ush1gQ80T11 Gm13401-201ENSMUST00000117074 291 ntBASIC19.02■□□□□ 0.64
Ush1gQ80T11 Gm9103-201ENSMUST00000119371 405 ntBASIC19.02■□□□□ 0.64
Ush1gQ80T11 Gm16061-201ENSMUST00000122167 857 ntBASIC19.02■□□□□ 0.64
Ush1gQ80T11 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.02■□□□□ 0.64
Ush1gQ80T11 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.02■□□□□ 0.64
Ush1gQ80T11 Gm4974-201ENSMUST00000209974 875 ntBASIC19.02■□□□□ 0.64
Ush1gQ80T11 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ush1gQ80T11 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Ush1gQ80T11 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ush1gQ80T11 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ush1gQ80T11 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ush1gQ80T11 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ush1gQ80T11 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ush1gQ80T11 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ush1gQ80T11 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ush1gQ80T11 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ush1gQ80T11 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Ush1gQ80T11 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ush1gQ80T11 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ush1gQ80T11 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ush1gQ80T11 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ush1gQ80T11 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ush1gQ80T11 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ush1gQ80T11 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ush1gQ80T11 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ush1gQ80T11 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.01■□□□□ 0.63
Ush1gQ80T11 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.01■□□□□ 0.63
Ush1gQ80T11 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ush1gQ80T11 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ush1gQ80T11 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ush1gQ80T11 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms