Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ubfd1Q78JW9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ubfd1Q78JW9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ubfd1Q78JW9 Gm17661-201ENSMUST00000170317 270 ntBASIC16.96■□□□□ 0.31
Ubfd1Q78JW9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Ubfd1Q78JW9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ubfd1Q78JW9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ubfd1Q78JW9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ubfd1Q78JW9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ubfd1Q78JW9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ubfd1Q78JW9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ubfd1Q78JW9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Ubfd1Q78JW9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ubfd1Q78JW9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ubfd1Q78JW9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ubfd1Q78JW9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ubfd1Q78JW9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ubfd1Q78JW9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ubfd1Q78JW9 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.95■□□□□ 0.3
Ubfd1Q78JW9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.95■□□□□ 0.3
Ubfd1Q78JW9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ubfd1Q78JW9 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.95■□□□□ 0.3
Ubfd1Q78JW9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ubfd1Q78JW9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ubfd1Q78JW9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ubfd1Q78JW9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ubfd1Q78JW9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.95■□□□□ 0.3
Ubfd1Q78JW9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ubfd1Q78JW9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ubfd1Q78JW9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Ubfd1Q78JW9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ubfd1Q78JW9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Ubfd1Q78JW9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Ubfd1Q78JW9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.95■□□□□ 0.3
Ubfd1Q78JW9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ubfd1Q78JW9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ubfd1Q78JW9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ubfd1Q78JW9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ubfd1Q78JW9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ubfd1Q78JW9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ubfd1Q78JW9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ubfd1Q78JW9 Gm10013-201ENSMUST00000106074 672 ntBASIC16.94■□□□□ 0.3
Ubfd1Q78JW9 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.94■□□□□ 0.3
Ubfd1Q78JW9 Gm18032-201ENSMUST00000222541 538 ntBASIC16.94■□□□□ 0.3
Ubfd1Q78JW9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ubfd1Q78JW9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Ubfd1Q78JW9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ubfd1Q78JW9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ubfd1Q78JW9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ubfd1Q78JW9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ubfd1Q78JW9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ubfd1Q78JW9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ubfd1Q78JW9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ubfd1Q78JW9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ubfd1Q78JW9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ubfd1Q78JW9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ubfd1Q78JW9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ubfd1Q78JW9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ubfd1Q78JW9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.93■□□□□ 0.3
Ubfd1Q78JW9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ubfd1Q78JW9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ubfd1Q78JW9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ubfd1Q78JW9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ubfd1Q78JW9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ubfd1Q78JW9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ubfd1Q78JW9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Ubfd1Q78JW9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ubfd1Q78JW9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ubfd1Q78JW9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ubfd1Q78JW9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubfd1Q78JW9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubfd1Q78JW9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubfd1Q78JW9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ubfd1Q78JW9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubfd1Q78JW9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Ubfd1Q78JW9 Gm6659-201ENSMUST00000174752 547 ntBASIC16.92■□□□□ 0.3
Ubfd1Q78JW9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.92■□□□□ 0.3
Ubfd1Q78JW9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.92■□□□□ 0.3
Ubfd1Q78JW9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.92■□□□□ 0.3
Ubfd1Q78JW9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubfd1Q78JW9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ubfd1Q78JW9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubfd1Q78JW9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ubfd1Q78JW9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubfd1Q78JW9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ubfd1Q78JW9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ubfd1Q78JW9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubfd1Q78JW9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ubfd1Q78JW9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubfd1Q78JW9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ubfd1Q78JW9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubfd1Q78JW9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubfd1Q78JW9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.91■□□□□ 0.3
Ubfd1Q78JW9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ubfd1Q78JW9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ubfd1Q78JW9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Ubfd1Q78JW9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubfd1Q78JW9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Ubfd1Q78JW9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.91■□□□□ 0.3
Ubfd1Q78JW9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms