Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm8Q6ZWM4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm8Q6ZWM4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm8Q6ZWM4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm8Q6ZWM4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm8Q6ZWM4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Lsm8Q6ZWM4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm8Q6ZWM4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm8Q6ZWM4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm8Q6ZWM4 Gm24841-201ENSMUST00000158676 357 ntBASIC18.27■□□□□ 0.52
Lsm8Q6ZWM4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Lsm8Q6ZWM4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Lsm8Q6ZWM4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm8Q6ZWM4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Lsm8Q6ZWM4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm8Q6ZWM4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm8Q6ZWM4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm8Q6ZWM4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lsm8Q6ZWM4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
Lsm8Q6ZWM4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lsm8Q6ZWM4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Lsm8Q6ZWM4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm8Q6ZWM4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.26■□□□□ 0.51
Lsm8Q6ZWM4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.26■□□□□ 0.51
Lsm8Q6ZWM4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.26■□□□□ 0.51
Lsm8Q6ZWM4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Lsm8Q6ZWM4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm8Q6ZWM4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm8Q6ZWM4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.26■□□□□ 0.51
Lsm8Q6ZWM4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm8Q6ZWM4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm8Q6ZWM4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm8Q6ZWM4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm8Q6ZWM4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm8Q6ZWM4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm8Q6ZWM4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm8Q6ZWM4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.25■□□□□ 0.51
Lsm8Q6ZWM4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm8Q6ZWM4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm8Q6ZWM4 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm8Q6ZWM4 Gm27011-201ENSMUST00000182352 972 ntBASIC18.25■□□□□ 0.51
Lsm8Q6ZWM4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm8Q6ZWM4 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.25■□□□□ 0.51
Lsm8Q6ZWM4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm8Q6ZWM4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm8Q6ZWM4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm8Q6ZWM4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm8Q6ZWM4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.25■□□□□ 0.51
Lsm8Q6ZWM4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm8Q6ZWM4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm8Q6ZWM4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm8Q6ZWM4 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.24■□□□□ 0.51
Lsm8Q6ZWM4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm8Q6ZWM4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.24■□□□□ 0.51
Lsm8Q6ZWM4 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.24■□□□□ 0.51
Lsm8Q6ZWM4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm8Q6ZWM4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm8Q6ZWM4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Lsm8Q6ZWM4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm8Q6ZWM4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm8Q6ZWM4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm8Q6ZWM4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm8Q6ZWM4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm8Q6ZWM4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm8Q6ZWM4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Lsm8Q6ZWM4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.23■□□□□ 0.51
Lsm8Q6ZWM4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm8Q6ZWM4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm8Q6ZWM4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm8Q6ZWM4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm8Q6ZWM4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm8Q6ZWM4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm8Q6ZWM4 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm8Q6ZWM4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm8Q6ZWM4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm8Q6ZWM4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm8Q6ZWM4 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm8Q6ZWM4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm8Q6ZWM4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Lsm8Q6ZWM4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm8Q6ZWM4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm8Q6ZWM4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Lsm8Q6ZWM4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Lsm8Q6ZWM4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Lsm8Q6ZWM4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm8Q6ZWM4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm8Q6ZWM4 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.22■□□□□ 0.51
Lsm8Q6ZWM4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Lsm8Q6ZWM4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm8Q6ZWM4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm8Q6ZWM4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lsm8Q6ZWM4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsm8Q6ZWM4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsm8Q6ZWM4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsm8Q6ZWM4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsm8Q6ZWM4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Lsm8Q6ZWM4 Mir1199-201ENSMUST00000117015 119 ntBASIC18.21■□□□□ 0.51
Lsm8Q6ZWM4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsm8Q6ZWM4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Lsm8Q6ZWM4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms