Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx55Q6ZPL9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Ddx55Q6ZPL9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx55Q6ZPL9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx55Q6ZPL9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Ddx55Q6ZPL9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ddx55Q6ZPL9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.86■□□□□ 0.77
Ddx55Q6ZPL9 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.86■□□□□ 0.77
Ddx55Q6ZPL9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx55Q6ZPL9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx55Q6ZPL9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Ddx55Q6ZPL9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ddx55Q6ZPL9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx55Q6ZPL9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx55Q6ZPL9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx55Q6ZPL9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx55Q6ZPL9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx55Q6ZPL9 Mir8112-201ENSMUST00000184382 131 ntBASIC19.85■□□□□ 0.77
Ddx55Q6ZPL9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx55Q6ZPL9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx55Q6ZPL9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx55Q6ZPL9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Ddx55Q6ZPL9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx55Q6ZPL9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx55Q6ZPL9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.85■□□□□ 0.77
Ddx55Q6ZPL9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.85■□□□□ 0.77
Ddx55Q6ZPL9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx55Q6ZPL9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx55Q6ZPL9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx55Q6ZPL9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ddx55Q6ZPL9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx55Q6ZPL9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx55Q6ZPL9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.84■□□□□ 0.77
Ddx55Q6ZPL9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx55Q6ZPL9 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx55Q6ZPL9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx55Q6ZPL9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx55Q6ZPL9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx55Q6ZPL9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Ddx55Q6ZPL9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx55Q6ZPL9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx55Q6ZPL9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx55Q6ZPL9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.84■□□□□ 0.77
Ddx55Q6ZPL9 Idnk-204ENSMUST00000226010 1898 ntBASIC19.84■□□□□ 0.77
Ddx55Q6ZPL9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx55Q6ZPL9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Ddx55Q6ZPL9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ddx55Q6ZPL9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Ddx55Q6ZPL9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.83■□□□□ 0.77
Ddx55Q6ZPL9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.83■□□□□ 0.77
Ddx55Q6ZPL9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.83■□□□□ 0.76
Ddx55Q6ZPL9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ddx55Q6ZPL9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ddx55Q6ZPL9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.83■□□□□ 0.76
Ddx55Q6ZPL9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ddx55Q6ZPL9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Ddx55Q6ZPL9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ddx55Q6ZPL9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ddx55Q6ZPL9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ddx55Q6ZPL9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx55Q6ZPL9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx55Q6ZPL9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx55Q6ZPL9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.82■□□□□ 0.76
Ddx55Q6ZPL9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx55Q6ZPL9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx55Q6ZPL9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ddx55Q6ZPL9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx55Q6ZPL9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.81■□□□□ 0.76
Ddx55Q6ZPL9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.81■□□□□ 0.76
Ddx55Q6ZPL9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.81■□□□□ 0.76
Ddx55Q6ZPL9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx55Q6ZPL9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx55Q6ZPL9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx55Q6ZPL9 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.81■□□□□ 0.76
Ddx55Q6ZPL9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx55Q6ZPL9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx55Q6ZPL9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ddx55Q6ZPL9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx55Q6ZPL9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx55Q6ZPL9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx55Q6ZPL9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.8■□□□□ 0.76
Ddx55Q6ZPL9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx55Q6ZPL9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx55Q6ZPL9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx55Q6ZPL9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Ddx55Q6ZPL9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Ddx55Q6ZPL9 Gm28659-201ENSMUST00000188013 759 ntBASIC19.8■□□□□ 0.76
Ddx55Q6ZPL9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx55Q6ZPL9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx55Q6ZPL9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx55Q6ZPL9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx55Q6ZPL9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Ddx55Q6ZPL9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx55Q6ZPL9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx55Q6ZPL9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx55Q6ZPL9 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.8■□□□□ 0.76
Ddx55Q6ZPL9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx55Q6ZPL9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Ddx55Q6ZPL9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.79■□□□□ 0.76
Ddx55Q6ZPL9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms