Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.19■□□□□ 0.18
Timd4Q6U7R4 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.19■□□□□ 0.18
Timd4Q6U7R4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Timd4Q6U7R4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Timd4Q6U7R4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.19■□□□□ 0.18
Timd4Q6U7R4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Timd4Q6U7R4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Timd4Q6U7R4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.19■□□□□ 0.18
Timd4Q6U7R4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Timd4Q6U7R4 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Timd4Q6U7R4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.19■□□□□ 0.18
Timd4Q6U7R4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Timd4Q6U7R4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Timd4Q6U7R4 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Timd4Q6U7R4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Timd4Q6U7R4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Timd4Q6U7R4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Timd4Q6U7R4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Timd4Q6U7R4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Timd4Q6U7R4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Timd4Q6U7R4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Timd4Q6U7R4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Timd4Q6U7R4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Timd4Q6U7R4 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Timd4Q6U7R4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Timd4Q6U7R4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Timd4Q6U7R4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Timd4Q6U7R4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Timd4Q6U7R4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Timd4Q6U7R4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Timd4Q6U7R4 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.18■□□□□ 0.18
Timd4Q6U7R4 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.18■□□□□ 0.18
Timd4Q6U7R4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Timd4Q6U7R4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Timd4Q6U7R4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Timd4Q6U7R4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.18■□□□□ 0.18
Timd4Q6U7R4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Timd4Q6U7R4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Timd4Q6U7R4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Timd4Q6U7R4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.18■□□□□ 0.18
Timd4Q6U7R4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Timd4Q6U7R4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Timd4Q6U7R4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Timd4Q6U7R4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Timd4Q6U7R4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Timd4Q6U7R4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Timd4Q6U7R4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Timd4Q6U7R4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.17■□□□□ 0.18
Timd4Q6U7R4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.17■□□□□ 0.18
Timd4Q6U7R4 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.17■□□□□ 0.18
Timd4Q6U7R4 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.17■□□□□ 0.18
Timd4Q6U7R4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Timd4Q6U7R4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Timd4Q6U7R4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Timd4Q6U7R4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Timd4Q6U7R4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Timd4Q6U7R4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Timd4Q6U7R4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Timd4Q6U7R4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Timd4Q6U7R4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Timd4Q6U7R4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Timd4Q6U7R4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Timd4Q6U7R4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Timd4Q6U7R4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Timd4Q6U7R4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Timd4Q6U7R4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Timd4Q6U7R4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Timd4Q6U7R4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Timd4Q6U7R4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Timd4Q6U7R4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Timd4Q6U7R4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Timd4Q6U7R4 Mir5122-201ENSMUST00000175004 89 ntBASIC16.16■□□□□ 0.18
Timd4Q6U7R4 Mir6982-201ENSMUST00000184354 68 ntBASIC16.16■□□□□ 0.18
Timd4Q6U7R4 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Timd4Q6U7R4 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Timd4Q6U7R4 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Timd4Q6U7R4 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.16■□□□□ 0.18
Timd4Q6U7R4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Timd4Q6U7R4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Timd4Q6U7R4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Timd4Q6U7R4 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Timd4Q6U7R4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Timd4Q6U7R4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Timd4Q6U7R4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Timd4Q6U7R4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Timd4Q6U7R4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Timd4Q6U7R4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.15■□□□□ 0.18
Timd4Q6U7R4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Timd4Q6U7R4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.15■□□□□ 0.18
Timd4Q6U7R4 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.15■□□□□ 0.18
Timd4Q6U7R4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Timd4Q6U7R4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.15■□□□□ 0.18
Timd4Q6U7R4 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.15■□□□□ 0.18
Timd4Q6U7R4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Timd4Q6U7R4 Gm4974-201ENSMUST00000209974 875 ntBASIC16.15■□□□□ 0.18
Timd4Q6U7R4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Timd4Q6U7R4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Timd4Q6U7R4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Timd4Q6U7R4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Timd4Q6U7R4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms