Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx58Q6Q899 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC21.57■■□□□ 1.04
Ddx58Q6Q899 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx58Q6Q899 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Ddx58Q6Q899 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx58Q6Q899 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx58Q6Q899 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx58Q6Q899 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx58Q6Q899 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx58Q6Q899 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx58Q6Q899 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx58Q6Q899 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Ddx58Q6Q899 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
Ddx58Q6Q899 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx58Q6Q899 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx58Q6Q899 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx58Q6Q899 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.56■■□□□ 1.04
Ddx58Q6Q899 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx58Q6Q899 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx58Q6Q899 Spsb2-203ENSMUST00000112473 1322 ntBASIC21.55■■□□□ 1.04
Ddx58Q6Q899 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx58Q6Q899 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx58Q6Q899 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx58Q6Q899 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC21.55■■□□□ 1.04
Ddx58Q6Q899 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
Ddx58Q6Q899 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx58Q6Q899 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx58Q6Q899 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx58Q6Q899 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx58Q6Q899 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Ddx58Q6Q899 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx58Q6Q899 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx58Q6Q899 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
Ddx58Q6Q899 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC21.55■■□□□ 1.04
Ddx58Q6Q899 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx58Q6Q899 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC21.55■■□□□ 1.04
Ddx58Q6Q899 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx58Q6Q899 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx58Q6Q899 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx58Q6Q899 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx58Q6Q899 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC21.54■■□□□ 1.04
Ddx58Q6Q899 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC21.54■■□□□ 1.04
Ddx58Q6Q899 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx58Q6Q899 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx58Q6Q899 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx58Q6Q899 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx58Q6Q899 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx58Q6Q899 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Ddx58Q6Q899 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Ddx58Q6Q899 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx58Q6Q899 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx58Q6Q899 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx58Q6Q899 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx58Q6Q899 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Ddx58Q6Q899 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
Ddx58Q6Q899 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Ddx58Q6Q899 Mir1668-201ENSMUST00000184114 107 ntBASIC21.53■■□□□ 1.04
Ddx58Q6Q899 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx58Q6Q899 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Ddx58Q6Q899 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx58Q6Q899 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx58Q6Q899 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC21.53■■□□□ 1.04
Ddx58Q6Q899 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx58Q6Q899 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx58Q6Q899 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
Ddx58Q6Q899 Grk6-206ENSMUST00000224995 2971 ntBASIC21.52■■□□□ 1.04
Ddx58Q6Q899 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC21.52■■□□□ 1.04
Ddx58Q6Q899 Gm6728-201ENSMUST00000178117 1065 ntBASIC21.52■■□□□ 1.04
Ddx58Q6Q899 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx58Q6Q899 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx58Q6Q899 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx58Q6Q899 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Ddx58Q6Q899 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx58Q6Q899 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC21.51■■□□□ 1.03
Ddx58Q6Q899 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Ddx58Q6Q899 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx58Q6Q899 AA414768-201ENSMUST00000121924 1257 ntBASIC21.51■■□□□ 1.03
Ddx58Q6Q899 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx58Q6Q899 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC21.51■■□□□ 1.03
Ddx58Q6Q899 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx58Q6Q899 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx58Q6Q899 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx58Q6Q899 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx58Q6Q899 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx58Q6Q899 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx58Q6Q899 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx58Q6Q899 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC21.5■■□□□ 1.03
Ddx58Q6Q899 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Ddx58Q6Q899 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx58Q6Q899 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx58Q6Q899 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx58Q6Q899 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
Ddx58Q6Q899 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx58Q6Q899 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx58Q6Q899 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx58Q6Q899 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.5■■□□□ 1.03
Ddx58Q6Q899 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC21.5■■□□□ 1.03
Ddx58Q6Q899 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC21.5■■□□□ 1.03
Ddx58Q6Q899 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx58Q6Q899 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms