Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.67□□□□□ -0.06
Rif1Q6PR54 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rif1Q6PR54 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.67□□□□□ -0.06
Rif1Q6PR54 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rif1Q6PR54 Actl10-202ENSMUST00000226583 1501 ntBASIC14.67□□□□□ -0.06
Rif1Q6PR54 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rif1Q6PR54 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rif1Q6PR54 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rif1Q6PR54 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rif1Q6PR54 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rif1Q6PR54 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.67□□□□□ -0.06
Rif1Q6PR54 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rif1Q6PR54 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rif1Q6PR54 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Rif1Q6PR54 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Rif1Q6PR54 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.66□□□□□ -0.06
Rif1Q6PR54 Gm20949-201ENSMUST00000206478 952 ntBASIC14.66□□□□□ -0.06
Rif1Q6PR54 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.66□□□□□ -0.06
Rif1Q6PR54 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Rif1Q6PR54 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rif1Q6PR54 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rif1Q6PR54 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rif1Q6PR54 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rif1Q6PR54 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rif1Q6PR54 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rif1Q6PR54 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rif1Q6PR54 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rif1Q6PR54 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rif1Q6PR54 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rif1Q6PR54 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.66□□□□□ -0.06
Rif1Q6PR54 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rif1Q6PR54 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.66□□□□□ -0.06
Rif1Q6PR54 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Rif1Q6PR54 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rif1Q6PR54 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Rif1Q6PR54 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.66□□□□□ -0.06
Rif1Q6PR54 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rif1Q6PR54 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rif1Q6PR54 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rif1Q6PR54 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Rif1Q6PR54 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.65□□□□□ -0.06
Rif1Q6PR54 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rif1Q6PR54 Gm13401-201ENSMUST00000117074 291 ntBASIC14.65□□□□□ -0.06
Rif1Q6PR54 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rif1Q6PR54 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rif1Q6PR54 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.65□□□□□ -0.06
Rif1Q6PR54 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rif1Q6PR54 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rif1Q6PR54 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rif1Q6PR54 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rif1Q6PR54 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rif1Q6PR54 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rif1Q6PR54 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rif1Q6PR54 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rif1Q6PR54 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rif1Q6PR54 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rif1Q6PR54 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rif1Q6PR54 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rif1Q6PR54 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rif1Q6PR54 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rif1Q6PR54 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rif1Q6PR54 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rif1Q6PR54 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rif1Q6PR54 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rif1Q6PR54 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rif1Q6PR54 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.64□□□□□ -0.07
Rif1Q6PR54 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rif1Q6PR54 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rif1Q6PR54 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.64□□□□□ -0.07
Rif1Q6PR54 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rif1Q6PR54 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rif1Q6PR54 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rif1Q6PR54 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rif1Q6PR54 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rif1Q6PR54 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rif1Q6PR54 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Rif1Q6PR54 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Rif1Q6PR54 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Rif1Q6PR54 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.64□□□□□ -0.07
Rif1Q6PR54 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Rif1Q6PR54 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rif1Q6PR54 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rif1Q6PR54 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.64□□□□□ -0.07
Rif1Q6PR54 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rif1Q6PR54 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rif1Q6PR54 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rif1Q6PR54 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rif1Q6PR54 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rif1Q6PR54 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rif1Q6PR54 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rif1Q6PR54 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Rif1Q6PR54 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.63□□□□□ -0.07
Rif1Q6PR54 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.63□□□□□ -0.07
Rif1Q6PR54 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Rif1Q6PR54 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rif1Q6PR54 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rif1Q6PR54 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rif1Q6PR54 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rif1Q6PR54 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rif1Q6PR54 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms