Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Kdm3aQ6PCM1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Kdm3aQ6PCM1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Kdm3aQ6PCM1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.03■□□□□ 0.96
Kdm3aQ6PCM1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Kdm3aQ6PCM1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Kdm3aQ6PCM1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Kdm3aQ6PCM1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC21.03■□□□□ 0.96
Kdm3aQ6PCM1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Kdm3aQ6PCM1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.03■□□□□ 0.96
Kdm3aQ6PCM1 AC134329.2-201ENSMUST00000217897 428 ntBASIC21.03■□□□□ 0.96
Kdm3aQ6PCM1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Kdm3aQ6PCM1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.02■□□□□ 0.96
Kdm3aQ6PCM1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.02■□□□□ 0.96
Kdm3aQ6PCM1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Kdm3aQ6PCM1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Kdm3aQ6PCM1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Kdm3aQ6PCM1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Kdm3aQ6PCM1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Kdm3aQ6PCM1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Kdm3aQ6PCM1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Kdm3aQ6PCM1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Kdm3aQ6PCM1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Kdm3aQ6PCM1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Kdm3aQ6PCM1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Kdm3aQ6PCM1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Kdm3aQ6PCM1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC21.01■□□□□ 0.95
Kdm3aQ6PCM1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Kdm3aQ6PCM1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Kdm3aQ6PCM1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Kdm3aQ6PCM1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Kdm3aQ6PCM1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Kdm3aQ6PCM1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC21.01■□□□□ 0.95
Kdm3aQ6PCM1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Kdm3aQ6PCM1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC21.01■□□□□ 0.95
Kdm3aQ6PCM1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Kdm3aQ6PCM1 Gm18032-201ENSMUST00000222541 538 ntBASIC21.01■□□□□ 0.95
Kdm3aQ6PCM1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Kdm3aQ6PCM1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Kdm3aQ6PCM1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Kdm3aQ6PCM1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Kdm3aQ6PCM1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Kdm3aQ6PCM1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Kdm3aQ6PCM1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Kdm3aQ6PCM1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Kdm3aQ6PCM1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Kdm3aQ6PCM1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC21■□□□□ 0.95
Kdm3aQ6PCM1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Kdm3aQ6PCM1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC21■□□□□ 0.95
Kdm3aQ6PCM1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Kdm3aQ6PCM1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Kdm3aQ6PCM1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Kdm3aQ6PCM1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Kdm3aQ6PCM1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Kdm3aQ6PCM1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.99■□□□□ 0.95
Kdm3aQ6PCM1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Kdm3aQ6PCM1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Kdm3aQ6PCM1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Kdm3aQ6PCM1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Kdm3aQ6PCM1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.99■□□□□ 0.95
Kdm3aQ6PCM1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Kdm3aQ6PCM1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Kdm3aQ6PCM1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Kdm3aQ6PCM1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Kdm3aQ6PCM1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.99■□□□□ 0.95
Kdm3aQ6PCM1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Kdm3aQ6PCM1 Gm7370-201ENSMUST00000219471 767 ntBASIC20.99■□□□□ 0.95
Kdm3aQ6PCM1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Kdm3aQ6PCM1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Kdm3aQ6PCM1 Grk6-206ENSMUST00000224995 2971 ntBASIC20.98■□□□□ 0.95
Kdm3aQ6PCM1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Kdm3aQ6PCM1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Kdm3aQ6PCM1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Kdm3aQ6PCM1 Gm10013-201ENSMUST00000106074 672 ntBASIC20.98■□□□□ 0.95
Kdm3aQ6PCM1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Kdm3aQ6PCM1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
Kdm3aQ6PCM1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Kdm3aQ6PCM1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Kdm3aQ6PCM1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Kdm3aQ6PCM1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Kdm3aQ6PCM1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Kdm3aQ6PCM1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Kdm3aQ6PCM1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Kdm3aQ6PCM1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Kdm3aQ6PCM1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Kdm3aQ6PCM1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Kdm3aQ6PCM1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Kdm3aQ6PCM1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Kdm3aQ6PCM1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Kdm3aQ6PCM1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Kdm3aQ6PCM1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Kdm3aQ6PCM1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Kdm3aQ6PCM1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Kdm3aQ6PCM1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.96■□□□□ 0.95
Kdm3aQ6PCM1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.96■□□□□ 0.95
Kdm3aQ6PCM1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Kdm3aQ6PCM1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Kdm3aQ6PCM1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Kdm3aQ6PCM1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Kdm3aQ6PCM1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms