Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Herc4Q6PAV2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Herc4Q6PAV2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Herc4Q6PAV2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Herc4Q6PAV2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Herc4Q6PAV2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.25■□□□□ 0.67
Herc4Q6PAV2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Herc4Q6PAV2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.25■□□□□ 0.67
Herc4Q6PAV2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Herc4Q6PAV2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Herc4Q6PAV2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Herc4Q6PAV2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Herc4Q6PAV2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Herc4Q6PAV2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.25■□□□□ 0.67
Herc4Q6PAV2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Herc4Q6PAV2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Herc4Q6PAV2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Herc4Q6PAV2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Herc4Q6PAV2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Herc4Q6PAV2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Herc4Q6PAV2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.24■□□□□ 0.67
Herc4Q6PAV2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Herc4Q6PAV2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Herc4Q6PAV2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Herc4Q6PAV2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Herc4Q6PAV2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Herc4Q6PAV2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Herc4Q6PAV2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Herc4Q6PAV2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Herc4Q6PAV2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Herc4Q6PAV2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Herc4Q6PAV2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Herc4Q6PAV2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Herc4Q6PAV2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Herc4Q6PAV2 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.23■□□□□ 0.67
Herc4Q6PAV2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Herc4Q6PAV2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Herc4Q6PAV2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Herc4Q6PAV2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Herc4Q6PAV2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.23■□□□□ 0.67
Herc4Q6PAV2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Herc4Q6PAV2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Herc4Q6PAV2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Gm22240-201ENSMUST00000175225 82 ntBASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Gm10517-202ENSMUST00000192970 758 ntBASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.22■□□□□ 0.67
Herc4Q6PAV2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Herc4Q6PAV2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Herc4Q6PAV2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Herc4Q6PAV2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.21■□□□□ 0.67
Herc4Q6PAV2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Herc4Q6PAV2 Gm4974-201ENSMUST00000209974 875 ntBASIC19.21■□□□□ 0.67
Herc4Q6PAV2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Herc4Q6PAV2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Herc4Q6PAV2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Herc4Q6PAV2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Herc4Q6PAV2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Herc4Q6PAV2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Herc4Q6PAV2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Herc4Q6PAV2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Herc4Q6PAV2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Herc4Q6PAV2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Herc4Q6PAV2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Herc4Q6PAV2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Herc4Q6PAV2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Herc4Q6PAV2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Herc4Q6PAV2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Herc4Q6PAV2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Herc4Q6PAV2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Herc4Q6PAV2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Herc4Q6PAV2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Herc4Q6PAV2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.2■□□□□ 0.66
Herc4Q6PAV2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.2■□□□□ 0.66
Herc4Q6PAV2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Herc4Q6PAV2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms