Protein–RNA interactions for Protein: Q6NWW9

Fndc3b, Fibronectin type III domain-containing protein 3B, mousemouse

Known RBP Predictions only

Length 1,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc3bQ6NWW9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fndc3bQ6NWW9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fndc3bQ6NWW9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fndc3bQ6NWW9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fndc3bQ6NWW9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Fndc3bQ6NWW9 Mir8112-201ENSMUST00000184382 131 ntBASIC19.48■□□□□ 0.71
Fndc3bQ6NWW9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Fndc3bQ6NWW9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Fndc3bQ6NWW9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fndc3bQ6NWW9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fndc3bQ6NWW9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fndc3bQ6NWW9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fndc3bQ6NWW9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Fndc3bQ6NWW9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.47■□□□□ 0.71
Fndc3bQ6NWW9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fndc3bQ6NWW9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fndc3bQ6NWW9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.47■□□□□ 0.71
Fndc3bQ6NWW9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fndc3bQ6NWW9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fndc3bQ6NWW9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fndc3bQ6NWW9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.47■□□□□ 0.71
Fndc3bQ6NWW9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fndc3bQ6NWW9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Fndc3bQ6NWW9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fndc3bQ6NWW9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fndc3bQ6NWW9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Fndc3bQ6NWW9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fndc3bQ6NWW9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Fndc3bQ6NWW9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fndc3bQ6NWW9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fndc3bQ6NWW9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fndc3bQ6NWW9 Gm15794-201ENSMUST00000120182 631 ntBASIC19.46■□□□□ 0.71
Fndc3bQ6NWW9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fndc3bQ6NWW9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Fndc3bQ6NWW9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fndc3bQ6NWW9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fndc3bQ6NWW9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Fndc3bQ6NWW9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Fndc3bQ6NWW9 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.45■□□□□ 0.7
Fndc3bQ6NWW9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fndc3bQ6NWW9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Fndc3bQ6NWW9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Fndc3bQ6NWW9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Fndc3bQ6NWW9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Fndc3bQ6NWW9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.45■□□□□ 0.7
Fndc3bQ6NWW9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Fndc3bQ6NWW9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Fndc3bQ6NWW9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.45■□□□□ 0.7
Fndc3bQ6NWW9 Mzt1-203ENSMUST00000227948 952 ntBASIC19.45■□□□□ 0.7
Fndc3bQ6NWW9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fndc3bQ6NWW9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fndc3bQ6NWW9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fndc3bQ6NWW9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Fndc3bQ6NWW9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fndc3bQ6NWW9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Fndc3bQ6NWW9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Fndc3bQ6NWW9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Fndc3bQ6NWW9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fndc3bQ6NWW9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fndc3bQ6NWW9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fndc3bQ6NWW9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fndc3bQ6NWW9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fndc3bQ6NWW9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Fndc3bQ6NWW9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Fndc3bQ6NWW9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Fndc3bQ6NWW9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.44■□□□□ 0.7
Fndc3bQ6NWW9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.44■□□□□ 0.7
Fndc3bQ6NWW9 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.44■□□□□ 0.7
Fndc3bQ6NWW9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.44■□□□□ 0.7
Fndc3bQ6NWW9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fndc3bQ6NWW9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Fndc3bQ6NWW9 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.44■□□□□ 0.7
Fndc3bQ6NWW9 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.44■□□□□ 0.7
Fndc3bQ6NWW9 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.43■□□□□ 0.7
Fndc3bQ6NWW9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fndc3bQ6NWW9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fndc3bQ6NWW9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Fndc3bQ6NWW9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fndc3bQ6NWW9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Fndc3bQ6NWW9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.43■□□□□ 0.7
Fndc3bQ6NWW9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Fndc3bQ6NWW9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Fndc3bQ6NWW9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Fndc3bQ6NWW9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Fndc3bQ6NWW9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.43■□□□□ 0.7
Fndc3bQ6NWW9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.43■□□□□ 0.7
Fndc3bQ6NWW9 Birc2-201ENSMUST00000054878 378 ntBASIC19.43■□□□□ 0.7
Fndc3bQ6NWW9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fndc3bQ6NWW9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fndc3bQ6NWW9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fndc3bQ6NWW9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Fndc3bQ6NWW9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fndc3bQ6NWW9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Fndc3bQ6NWW9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fndc3bQ6NWW9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fndc3bQ6NWW9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fndc3bQ6NWW9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fndc3bQ6NWW9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Fndc3bQ6NWW9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Fndc3bQ6NWW9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms