Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VclQ64727 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VclQ64727 Mir6982-201ENSMUST00000184354 68 ntBASIC17.14■□□□□ 0.33
VclQ64727 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.14■□□□□ 0.33
VclQ64727 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.14■□□□□ 0.33
VclQ64727 Gm4974-201ENSMUST00000209974 875 ntBASIC17.14■□□□□ 0.33
VclQ64727 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
VclQ64727 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VclQ64727 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VclQ64727 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VclQ64727 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VclQ64727 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VclQ64727 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VclQ64727 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VclQ64727 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VclQ64727 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VclQ64727 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VclQ64727 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.13■□□□□ 0.33
VclQ64727 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VclQ64727 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.13■□□□□ 0.33
VclQ64727 Mir5122-201ENSMUST00000175004 89 ntBASIC17.13■□□□□ 0.33
VclQ64727 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
VclQ64727 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VclQ64727 Idnk-204ENSMUST00000226010 1898 ntBASIC17.13■□□□□ 0.33
VclQ64727 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VclQ64727 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VclQ64727 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VclQ64727 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
VclQ64727 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VclQ64727 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.13■□□□□ 0.33
VclQ64727 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VclQ64727 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VclQ64727 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VclQ64727 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.12■□□□□ 0.33
VclQ64727 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VclQ64727 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VclQ64727 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.12■□□□□ 0.33
VclQ64727 Gm37055-201ENSMUST00000191866 133 ntBASIC17.12■□□□□ 0.33
VclQ64727 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VclQ64727 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VclQ64727 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VclQ64727 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VclQ64727 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VclQ64727 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VclQ64727 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VclQ64727 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VclQ64727 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
VclQ64727 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VclQ64727 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VclQ64727 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VclQ64727 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VclQ64727 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
VclQ64727 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.11■□□□□ 0.33
VclQ64727 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VclQ64727 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VclQ64727 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VclQ64727 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VclQ64727 Gm13401-201ENSMUST00000117074 291 ntBASIC17.11■□□□□ 0.33
VclQ64727 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
VclQ64727 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.11■□□□□ 0.33
VclQ64727 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.11■□□□□ 0.33
VclQ64727 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
VclQ64727 Odf3b-204ENSMUST00000227834 930 ntBASIC17.11■□□□□ 0.33
VclQ64727 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VclQ64727 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VclQ64727 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VclQ64727 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VclQ64727 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VclQ64727 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VclQ64727 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VclQ64727 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VclQ64727 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VclQ64727 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VclQ64727 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VclQ64727 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.11■□□□□ 0.33
VclQ64727 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
VclQ64727 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
VclQ64727 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
VclQ64727 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
VclQ64727 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VclQ64727 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VclQ64727 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VclQ64727 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
VclQ64727 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
VclQ64727 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.1■□□□□ 0.33
VclQ64727 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.1■□□□□ 0.33
VclQ64727 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
VclQ64727 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VclQ64727 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VclQ64727 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.1■□□□□ 0.33
VclQ64727 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
VclQ64727 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VclQ64727 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VclQ64727 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VclQ64727 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VclQ64727 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
VclQ64727 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.09■□□□□ 0.33
VclQ64727 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VclQ64727 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VclQ64727 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms