Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc3Q64519 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc3Q64519 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.71■□□□□ 0.27
Sdc3Q64519 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc3Q64519 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc3Q64519 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.71■□□□□ 0.27
Sdc3Q64519 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc3Q64519 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc3Q64519 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Sdc3Q64519 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc3Q64519 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Sdc3Q64519 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Sdc3Q64519 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc3Q64519 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Sdc3Q64519 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc3Q64519 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Sdc3Q64519 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc3Q64519 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc3Q64519 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc3Q64519 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc3Q64519 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc3Q64519 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc3Q64519 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Sdc3Q64519 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc3Q64519 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc3Q64519 Gm12085-201ENSMUST00000119263 940 ntBASIC16.7■□□□□ 0.26
Sdc3Q64519 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc3Q64519 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.7■□□□□ 0.26
Sdc3Q64519 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc3Q64519 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Sdc3Q64519 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc3Q64519 Gm10517-202ENSMUST00000192970 758 ntBASIC16.7■□□□□ 0.26
Sdc3Q64519 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.7■□□□□ 0.26
Sdc3Q64519 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.7■□□□□ 0.26
Sdc3Q64519 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc3Q64519 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc3Q64519 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc3Q64519 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc3Q64519 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc3Q64519 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc3Q64519 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc3Q64519 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc3Q64519 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc3Q64519 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Sdc3Q64519 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc3Q64519 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.69■□□□□ 0.26
Sdc3Q64519 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc3Q64519 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc3Q64519 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc3Q64519 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Sdc3Q64519 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.69■□□□□ 0.26
Sdc3Q64519 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.69■□□□□ 0.26
Sdc3Q64519 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.69■□□□□ 0.26
Sdc3Q64519 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.69■□□□□ 0.26
Sdc3Q64519 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc3Q64519 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc3Q64519 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc3Q64519 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc3Q64519 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.69■□□□□ 0.26
Sdc3Q64519 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.69■□□□□ 0.26
Sdc3Q64519 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc3Q64519 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sdc3Q64519 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sdc3Q64519 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sdc3Q64519 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sdc3Q64519 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sdc3Q64519 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sdc3Q64519 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sdc3Q64519 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sdc3Q64519 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sdc3Q64519 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.68■□□□□ 0.26
Sdc3Q64519 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sdc3Q64519 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.68■□□□□ 0.26
Sdc3Q64519 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sdc3Q64519 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.68■□□□□ 0.26
Sdc3Q64519 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sdc3Q64519 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sdc3Q64519 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc3Q64519 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc3Q64519 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc3Q64519 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Sdc3Q64519 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.67■□□□□ 0.26
Sdc3Q64519 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc3Q64519 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Sdc3Q64519 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc3Q64519 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.67■□□□□ 0.26
Sdc3Q64519 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc3Q64519 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.67■□□□□ 0.26
Sdc3Q64519 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc3Q64519 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc3Q64519 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc3Q64519 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc3Q64519 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.67■□□□□ 0.26
Sdc3Q64519 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc3Q64519 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc3Q64519 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc3Q64519 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc3Q64519 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc3Q64519 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc3Q64519 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms