Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox19Q62249 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox19Q62249 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.92□□□□□ -0.02
Sox19Q62249 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.92□□□□□ -0.02
Sox19Q62249 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox19Q62249 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox19Q62249 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox19Q62249 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox19Q62249 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.92□□□□□ -0.02
Sox19Q62249 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox19Q62249 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox19Q62249 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox19Q62249 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox19Q62249 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Sox19Q62249 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox19Q62249 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox19Q62249 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Sox19Q62249 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Sox19Q62249 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Sox19Q62249 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.91□□□□□ -0.02
Sox19Q62249 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.91□□□□□ -0.02
Sox19Q62249 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Sox19Q62249 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.91□□□□□ -0.02
Sox19Q62249 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.91□□□□□ -0.02
Sox19Q62249 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox19Q62249 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox19Q62249 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox19Q62249 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox19Q62249 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox19Q62249 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.91□□□□□ -0.02
Sox19Q62249 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox19Q62249 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox19Q62249 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox19Q62249 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox19Q62249 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Sox19Q62249 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox19Q62249 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox19Q62249 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Sox19Q62249 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox19Q62249 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox19Q62249 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox19Q62249 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox19Q62249 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Sox19Q62249 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.9□□□□□ -0.02
Sox19Q62249 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Sox19Q62249 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.9□□□□□ -0.02
Sox19Q62249 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.9□□□□□ -0.02
Sox19Q62249 Reep4-203ENSMUST00000226563 1444 ntBASIC14.9□□□□□ -0.02
Sox19Q62249 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox19Q62249 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox19Q62249 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox19Q62249 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox19Q62249 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox19Q62249 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox19Q62249 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox19Q62249 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox19Q62249 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox19Q62249 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Sox19Q62249 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox19Q62249 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox19Q62249 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox19Q62249 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox19Q62249 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox19Q62249 Gm27454-201ENSMUST00000185090 204 ntBASIC14.89□□□□□ -0.03
Sox19Q62249 Gm43017-201ENSMUST00000198296 752 ntBASIC14.89□□□□□ -0.03
Sox19Q62249 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox19Q62249 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox19Q62249 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox19Q62249 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox19Q62249 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Sox19Q62249 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox19Q62249 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Sox19Q62249 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox19Q62249 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox19Q62249 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox19Q62249 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox19Q62249 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox19Q62249 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.89□□□□□ -0.03
Sox19Q62249 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox19Q62249 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Sox19Q62249 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox19Q62249 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox19Q62249 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox19Q62249 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox19Q62249 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox19Q62249 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox19Q62249 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.88□□□□□ -0.03
Sox19Q62249 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.88□□□□□ -0.03
Sox19Q62249 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox19Q62249 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sox19Q62249 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox19Q62249 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox19Q62249 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox19Q62249 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox19Q62249 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox19Q62249 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox19Q62249 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox19Q62249 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox19Q62249 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Sox19Q62249 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms