Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.05■□□□□ 0.32
Six3Q62233 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Six3Q62233 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six3Q62233 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.05■□□□□ 0.32
Six3Q62233 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Six3Q62233 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.05■□□□□ 0.32
Six3Q62233 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Six3Q62233 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six3Q62233 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six3Q62233 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.05■□□□□ 0.32
Six3Q62233 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six3Q62233 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Six3Q62233 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Six3Q62233 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six3Q62233 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six3Q62233 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Six3Q62233 Dio3-201ENSMUST00000097228 1449 ntBASIC17.04■□□□□ 0.32
Six3Q62233 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six3Q62233 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six3Q62233 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six3Q62233 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Six3Q62233 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Six3Q62233 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six3Q62233 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six3Q62233 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Six3Q62233 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.04■□□□□ 0.32
Six3Q62233 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six3Q62233 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.04■□□□□ 0.32
Six3Q62233 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six3Q62233 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.04■□□□□ 0.32
Six3Q62233 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six3Q62233 Gm10602-201ENSMUST00000098239 609 ntBASIC17.04■□□□□ 0.32
Six3Q62233 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Six3Q62233 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Six3Q62233 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Six3Q62233 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six3Q62233 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six3Q62233 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six3Q62233 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Six3Q62233 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Six3Q62233 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six3Q62233 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Six3Q62233 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Six3Q62233 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six3Q62233 Gm12896-201ENSMUST00000118430 226 ntBASIC17.03■□□□□ 0.32
Six3Q62233 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six3Q62233 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six3Q62233 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Six3Q62233 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six3Q62233 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six3Q62233 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Six3Q62233 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.02■□□□□ 0.32
Six3Q62233 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six3Q62233 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Six3Q62233 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six3Q62233 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.02■□□□□ 0.32
Six3Q62233 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six3Q62233 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Six3Q62233 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Six3Q62233 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Six3Q62233 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Six3Q62233 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six3Q62233 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Six3Q62233 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.01■□□□□ 0.31
Six3Q62233 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Six3Q62233 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six3Q62233 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six3Q62233 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Six3Q62233 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Six3Q62233 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Six3Q62233 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six3Q62233 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Six3Q62233 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Six3Q62233 Gm11249-201ENSMUST00000117071 859 ntBASIC17.01■□□□□ 0.31
Six3Q62233 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.01■□□□□ 0.31
Six3Q62233 Gm15039-201ENSMUST00000118914 875 ntBASIC17.01■□□□□ 0.31
Six3Q62233 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Six3Q62233 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Six3Q62233 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six3Q62233 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.01■□□□□ 0.31
Six3Q62233 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six3Q62233 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.01■□□□□ 0.31
Six3Q62233 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six3Q62233 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.01■□□□□ 0.31
Six3Q62233 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Six3Q62233 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.01■□□□□ 0.31
Six3Q62233 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Six3Q62233 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six3Q62233 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Six3Q62233 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six3Q62233 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17■□□□□ 0.31
Six3Q62233 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17■□□□□ 0.31
Six3Q62233 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Six3Q62233 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Six3Q62233 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17■□□□□ 0.31
Six3Q62233 Gm10138-203ENSMUST00000206952 366 ntBASIC17■□□□□ 0.31
Six3Q62233 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six3Q62233 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six3Q62233 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Six3Q62233 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms